STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG07004.1KEGG: mpd:MCP_1380 hypothetical protein; SPTR: Putative uncharacterized protein. (162 aa)    
Predicted Functional Partners:
EJG07002.1
PFAM: Cupin domain; COGs: COG1917 conserved hypothetical protein contains double-stranded beta-helix domain; InterPro IPR013096; KEGG: mpl:Mpal_1618 cupin 2 conserved barrel domain protein; PFAM: Cupin 2, conserved barrel; SPTR: Cupin 2 conserved barrel domain protein.
 
     0.686
EJG06224.1
Flavodoxin/nitric oxide synthase; InterPro IPR008254; KEGG: mem:Memar_2171 ArsR family transcriptional regulator; PFAM: Flavodoxin/nitric oxide synthase; SPTR: Transcriptional regulator, ArsR family.
  
     0.685
EJG07003.1
PFAM: Aldo/keto reductase family; COGs: COG1453 oxidoreductase of the aldo/keto reductase family; InterPro IPR001395; KEGG: mpl:Mpal_1623 aldo/keto reductase; PFAM: Aldo/keto reductase; SPTR: Aldo/keto reductase.
 
    0.671
EJG07001.1
PFAM: NADPH-dependent FMN reductase; COGs: COG0655 Multimeric flavodoxin WrbA; InterPro IPR005025; KEGG: mpd:MCP_1378 putative iron-sulfur flavoprotein; PFAM: NADPH-dependent FMN reductase; SPTR: Putative iron-sulfur flavoprotein.
 
  
  0.590
EJG07005.1
PFAM: HxlR-like helix-turn-helix; COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: mpl:Mpal_1617 transcriptional regulator, HxlR family; PFAM: Helix-turn-helix, HxlR type; SPTR: Transcriptional regulator, HxlR family.
       0.540
EJG07845.1
Formate dehydrogenase, alpha subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, archaeal-type; COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterPro IPR006478:IPR006963:IPR006656:IPR006657; KEGG: mem:Memar_1381 formate dehydrogenase, alpha subunit; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Molydopterin dinucleotide-binding region; SPTR: Formate dehydrogenase, alpha subunit (F420); TIGRFAM: Formate dehydrogenase, alp [...]
  
  
  0.538
EJG07778.1
PFAM: Oxidoreductase molybdopterin binding domain; InterPro IPR000572; KEGG: mla:Mlab_1026 hypothetical protein; PFAM: Oxidoreductase, molybdopterin binding; SPTR: Putative uncharacterized protein.
  
 
  0.510
EJG06508.1
CheC, inhibitor of MCP methylation; PFAM: CheC-like family; COGs: COG1776 Chemotaxis protein CheC inhibitor of MCP methylation; InterPro IPR007597; KEGG: mpi:Mpet_1206 MCP methylation inhibitor CheC; PFAM: CheC-like protein; SPTR: CheC, inhibitor of MCP methylation.
    
   0.497
EJG07202.1
CheC, inhibitor of MCP methylation; PFAM: CheC-like family; COGs: COG1776 Chemotaxis protein CheC inhibitor of MCP methylation; InterPro IPR007597; KEGG: mpl:Mpal_1855 CheC, inhibitor of MCP methylation; PFAM: CheC-like protein; SPTR: CheC, inhibitor of MCP methylation.
    
   0.497
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
    
  0.475
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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