STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG07019.1Protein of unknown function DUF169; PFAM: Uncharacterised ArCR, COG2043; COGs: COG2043 conserved hypothetical protein; InterPro IPR003748; KEGG: mpi:Mpet_0435 hypothetical protein; PFAM: Protein of unknown function DUF169; SPTR: Putative uncharacterized protein. (226 aa)    
Predicted Functional Partners:
EJG07020.1
PFAM: DsrE/DsrF-like family; SirA-like protein; COGs: COG2044 peroxiredoxins; InterPro IPR003787; KEGG: mpi:Mpet_0434 DsrE family protein; PFAM: Sulphur relay, DsrE-like protein; SPTR: DsrE family protein.
 
     0.853
EJG07021.1
KEGG: mpi:Mpet_0433 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.775
EJG07018.1
GAF domain protein; InterPro IPR003018; KEGG: mpi:Mpet_0436 putative GAF sensor protein; PFAM: GAF; SMART: GAF; SPTR: Putative GAF sensor protein.
 
     0.713
EJG07022.1
Hypothetical protein.
       0.562
mtrE
Tetrahydromethanopterin S-methyltransferase subunit E; Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step.
  
   
 0.503
EJG07239.1
PFAM: Uncharacterized protein conserved in archaea (DUF2111); COGs: COG4048 conserved hypothetical protein; InterPro IPR012029; KEGG: mem:Memar_1649 hypothetical protein; PFAM: Uncharacterised conserved protein UCP006557, signal transduction; SPTR: Putative uncharacterized protein.
  
    0.492
EJG06470.1
PFAM: Methyl-coenzyme M reductase beta subunit, C-terminal domain; Methyl-coenzyme M reductase beta subunit, N-terminal domain; TIGRFAM: methyl-coenzyme M reductase, beta subunit; COGs: COG4054 Methyl coenzyme M reductase beta subunit; InterPro IPR003179; KEGG: mem:Memar_0617 methyl-coenzyme M reductase, beta subunit; PFAM: Methyl-coenzyme M reductase, beta subunit; SPTR: Methyl-coenzyme M reductase, beta subunit; TIGRFAM: Methyl-coenzyme M reductase, beta subunit.
 
   
 0.479
EJG06466.1
Methyl-coenzyme M reductase, alpha subunit; Component of the methyl-coenzyme M reductase (MCR) I that catalyzes the reductive cleavage of methyl-coenzyme M (CoM-S-CH3 or 2- (methylthio)ethanesulfonate) using coenzyme B (CoB or 7- mercaptoheptanoylthreonine phosphate) as reductant which results in the production of methane and the mixed heterodisulfide of CoB and CoM (CoM-S-S-CoB). This is the final step in methanogenesis.
 
     0.478
EJG07654.1
Methyl-coenzyme M reductase, alpha subunit; Component of the methyl-coenzyme M reductase (MCR) I that catalyzes the reductive cleavage of methyl-coenzyme M (CoM-S-CH3 or 2- (methylthio)ethanesulfonate) using coenzyme B (CoB or 7- mercaptoheptanoylthreonine phosphate) as reductant which results in the production of methane and the mixed heterodisulfide of CoB and CoM (CoM-S-S-CoB). This is the final step in methanogenesis.
 
     0.478
EJG07657.1
PFAM: Methyl-coenzyme M reductase beta subunit, C-terminal domain; Methyl-coenzyme M reductase beta subunit, N-terminal domain; TIGRFAM: methyl-coenzyme M reductase, beta subunit; COGs: COG4054 Methyl coenzyme M reductase beta subunit; InterPro IPR003179; KEGG: mem:Memar_0375 methyl-coenzyme M reductase, beta subunit; PFAM: Methyl-coenzyme M reductase, beta subunit; SPTR: Methyl-coenzyme M reductase, beta subunit; TIGRFAM: Methyl-coenzyme M reductase, beta subunit.
 
   
 0.468
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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