STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG07033.1PAS sensor protein; PFAM: PAS fold; TIGRFAM: PAS domain S-box; InterPro IPR013767:IPR000014; KEGG: mem:Memar_0782 putative PAS/PAC sensor protein; PFAM: PAS fold; SPTR: Putative PAS/PAC sensor protein; TIGRFAM: PAS. (455 aa)    
Predicted Functional Partners:
EJG07113.1
Putative PAS/PAC sensor protein; PFAM: PAS fold; TIGRFAM: PAS domain S-box; COGs: COG2202 FOG: PAS/PAC domain; InterPro IPR013655:IPR013656:IPR000014; KEGG: mmg:MTBMA_c12200 sensory transduction histidine kinase; PFAM: PAS fold-3; PAS fold-4; SMART: PAS; SPTR: Predicted sensory transduction histidine kinase; TIGRFAM: PAS.
  
  
 0.985
EJG08266.1
PAS/PAC sensor signal transduction histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR001610:IPR003594:IPR013655:IPR 013656; KEGG: mpi:Mpet_2338 multi-sensor signal transduction histidine kinase; PFAM: PAS fold-4; PAS fold-3; ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; PAS; PAC motif; SPTR: Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS.
 
  
  0.984
EJG08392.1
CheA signal transduction histidine kinase; PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; Hpt domain; COGs: COG0643 Chemotaxis protein histidine kinase and related kinase; InterPro IPR008207:IPR003594:IPR002545:IPR001789; KEGG: mem:Memar_0238 CheA signal transduction histidine kinases; PFAM: Signal transduction response regulator, receiver region; CheW-like protein; ATP-binding region, ATPase-like; Signal transduction histidine kinase, phosphotransfer (Hpt) region; SMART: Signal transduction response regulator, recei [...]
  
  
  0.983
EJG08313.1
Multi-sensor signal transduction histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterProIPR001789:IPR000014:IPR001610:IPR003594:IPR 013655:IPR013767:IPR013656; KEGG: mpi:Mpet_0602 multi-sensor signal transduction histidine kinase; PFAM: Signal transduction response regulator, receiver region; PAS fold-3; PAS fold; PAS fold-4; ATP-binding region, ATPase-like; SMART: Signal transduction response regulator, receiver region; PAS [...]
  
  
  0.964
EJG07026.1
Multi-sensor signal transduction histidine kinase; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR001789:IPR013767:IPR013655:IPR013656:IPR 003594:IPR000014; KEGG: mpl:Mpal_1755 multi-sensor signal transduction histidine kinase; PFAM: Signal transduction response regulator, receiver region; PAS fold; PAS fold-3; PAS fold-4; ATP-binding region, ATPase-like; SMART: Signal transduction res [...]
  
  
  0.959
EJG07535.1
Putative PAS/PAC sensor protein; PFAM: Response regulator receiver domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR000014:IPR001789:IPR013767:IPR013655:IPR 001610; KEGG: mhu:Mhun_1353 multi-sensor signal transduction histidine kinase; PFAM: PAS fold-3; Signal transduction response regulator, receiver region; PAS fold; SMART: Signal transduction response regulator, receiver region; PAS; PAC motif; SPTR: PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS.
 
  
  0.959
EJG08393.1
Methyl-accepting chemotaxis sensory transducer with Cache sensor; PFAM: Cache domain; HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR013163:IPR003660:IPR004089; KEGG: mem:Memar_0239 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; Cache, type 2; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SPTR: Methyl-accepting chemotaxis sensory transducer.
  
  
  0.958
EJG08055.1
Multi-sensor signal transduction histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR001789:IPR000014:IPR003594:IPR013655:IPR 013767:IPR013656; KEGG: mbn:Mboo_2110 multi-sensor signal transduction histidine kinase; PFAM: Signal transduction response regulator, receiver region; PAS fold-3; PAS fold; PAS fold-4; ATP-binding region, ATPase-like; SMART: Signal transduction res [...]
  
  
  0.956
EJG07766.1
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterPro IPR003594; KEGG: mpl:Mpal_1640 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; SPTR: Multi-sensor signal transduction histidine kinase.
  
  
  0.954
EJG07667.1
Putative PAS/PAC sensor protein; PFAM: GAF domain; Response regulator receiver domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR000014:IPR001789:IPR013656:IPR003018; KEGG: npu:Npun_R2903 multi-sensor signal transduction histidine kinase; PFAM: Signal transduction response regulator, receiver region; PAS fold-4; GAF; SMART: Signal transduction response regulator, receiver region; PAS; GAF; SPTR: Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS.
    
  0.947
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.