STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG07034.1Protein of unknown function DUF2070, membrane; PFAM: Predicted membrane protein (DUF2070); COGs: COG3356 membrane protein; InterPro IPR019204; KEGG: mem:Memar_0860 hypothetical protein; PFAM: Protein of unknown function DUF2070, membrane; SPTR: Putative uncharacterized protein. (582 aa)    
Predicted Functional Partners:
EJG07035.1
PfkB domain protein; PFAM: pfkB family carbohydrate kinase; COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR011611; KEGG: mpl:Mpal_1085 PfkB domain protein; PFAM: Carbohydrate/purine kinase; SPTR: PfkB domain protein; Belongs to the carbohydrate kinase PfkB family.
 
     0.926
EJG07036.1
PFAM: Protein of unknown function (DUF555); COGs: COG1885 conserved hypothetical protein; HAMAP: Uncharacterised protein family UPF0212; InterPro IPR007564; KEGG: mem:Memar_0858 hypothetical protein; PFAM: Uncharacterised protein family UPF0212; SPTR: UPF0212 protein Memar_0858; Belongs to the UPF0212 family.
       0.913
EJG07037.1
PFAM: Nitroreductase family; TIGRFAM: SagB-type dehydrogenase domain; COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: mem:Memar_0857 nitroreductase; PFAM: Nitroreductase-like; SPTR: Nitroreductase.
 
     0.704
EJG07038.1
KEGG: mbn:Mboo_1661 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.664
EJG07411.1
KEGG: mem:Memar_1065 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.591
EJG07410.1
KEGG: mpl:Mpal_2353 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.589
EJG07033.1
PAS sensor protein; PFAM: PAS fold; TIGRFAM: PAS domain S-box; InterPro IPR013767:IPR000014; KEGG: mem:Memar_0782 putative PAS/PAC sensor protein; PFAM: PAS fold; SPTR: Putative PAS/PAC sensor protein; TIGRFAM: PAS.
 
     0.562
EJG06818.1
PFAM: Bacterial regulatory protein, arsR family; COGs: COG1777 transcriptional regulator protein; InterPro IPR001845; KEGG: mpl:Mpal_2059 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Transcriptional regulator, ArsR family.
  
     0.558
EJG06259.1
Methyltransferase type 12; PFAM: Mitochondrial small ribosomal subunit Rsm22; InterPro IPR013217; KEGG: rci:LRC454 hypothetical protein; PFAM: Methyltransferase type 12; SPTR: Putative uncharacterized protein.
  
     0.557
EJG06771.1
COGs: COG1202 Superfamily II helicase; KEGG: mem:Memar_1610 superfamily II helicase-like protein; SPTR: Superfamily II helicase-like protein.
  
     0.542
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.