Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EJG07079.1PFAM: Citrate transporter; COGs: COG1055 Na+/H+ antiporter NhaD and related arsenite permease; InterPro IPR004680; KEGG: mem:Memar_2132 citrate transporter; PFAM: Divalent ion symporter; SPTR: Possible tyrosine transporter P-protein. (425 aa)    
Predicted Functional Partners:
EJG07078.1
KEGG: mem:Memar_0828 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.818
EJG06245.1
PFAM: Citrate transporter; TrkA-C domain; COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR004680:IPR006037; KEGG: mpi:Mpet_2047 TrkA-C domain-containing protein; PFAM: Regulator of K+ conductance, C-terminal; Divalent ion symporter; SPTR: TrkA-C domain protein.
     
 0.708
EJG07081.1
UspA domain-containing protein; PFAM: Universal stress protein family; InterPro IPR006016; KEGG: tba:TERMP_01462 hypothetical protein; PFAM: UspA; SPTR: Universal stress protein family, putative; manually curated.
     
 0.617
EJG07077.1
PFAM: Peptidase family M54; COGs: COG1913 Zn-dependent protease; InterPro IPR012962; KEGG: mpl:Mpal_1753 peptidase zinc-dependent; PFAM: Peptidase M54, archaemetzincin; SPTR: Peptidase zinc-dependent.
       0.601
EJG07080.1
PFAM: Citrate transporter; COGs: COG1055 Na+/H+ antiporter NhaD and related arsenite permease; InterPro IPR004680; KEGG: tba:TERMP_01463 NhaD-like Na+/H+ antiporter; PFAM: Divalent ion symporter; SPTR: Citrate transporter superfamily.
 
    
0.491
EJG07076.1
Protein of unknown function UPF0146; PFAM: Uncharacterised protein family (UPF0146); COGs: COG1255 conserved hypothetical protein; InterPro IPR005353; KEGG: mpi:Mpet_2257 hypothetical protein; PFAM: Uncharacterised protein family UPF0146; SPTR: Putative uncharacterized protein; Belongs to the UPF0146 family.
       0.452
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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