STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG07111.1PFAM: Bacterial Ig-like domain (group 2); InterPro IPR003343; KEGG: mpl:Mpal_1812 PKD domain containing protein; PFAM: Bacterial Ig-like, group 2; SMART: Bacterial Ig-like, group 2; SPTR: PKD domain containing protein. (698 aa)    
Predicted Functional Partners:
EJG07018.1
GAF domain protein; InterPro IPR003018; KEGG: mpi:Mpet_0436 putative GAF sensor protein; PFAM: GAF; SMART: GAF; SPTR: Putative GAF sensor protein.
  
     0.603
EJG08186.1
Hypothetical protein; TIGRFAM: Chlamydial polymorphic outer membrane protein repeat; KEGG: mla:Mlab_1452 hypothetical protein; SPTR: Putative anti-sigma regulatory factor, serine/threonine protein kinase.
  
     0.602
EJG07112.1
Hypothetical protein.
       0.542
EJG06165.1
PFAM: UvrD/REP helicase; COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR000212; KEGG: mel:Metbo_1561 UvrD/REP helicase; PFAM: DNA helicase, UvrD/REP type; SPTR: UvrD/REP helicase family protein.
  
     0.494
EJG05988.1
KEGG: mem:Memar_0788 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.473
EJG07113.1
Putative PAS/PAC sensor protein; PFAM: PAS fold; TIGRFAM: PAS domain S-box; COGs: COG2202 FOG: PAS/PAC domain; InterPro IPR013655:IPR013656:IPR000014; KEGG: mmg:MTBMA_c12200 sensory transduction histidine kinase; PFAM: PAS fold-3; PAS fold-4; SMART: PAS; SPTR: Predicted sensory transduction histidine kinase; TIGRFAM: PAS.
       0.460
EJG07783.1
KEGG: swo:Swol_2188 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.419
EJG06445.1
PFAM: Pyridoxamine 5'-phosphate oxidase; NADPH-dependent FMN reductase; InterPro IPR011576; KEGG: mth:MTH1484 hypothetical protein; PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; SPTR: Putative uncharacterized protein.
  
     0.400
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.