STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG07132.1ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; haloacid dehalogenase-like hydrolase; Cation transporter/ATPase, N-terminus; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; COGs: COG0474 Cation transport ATPase; InterProIPR004014:IPR008250:IPR005834:IPR006068:IPR 001757; KEGG: tcx:Tcr_1065 ATPase, E1-E2 type; PFAM: ATPase, P-type, ATPase-associated region; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal; SPTR [...] (895 aa)    
Predicted Functional Partners:
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
    
 0.930
EJG06847.1
PFAM: DHH family; DRTGG domain; DHHA2 domain; CBS domain; COGs: COG1227 Inorganic pyrophosphatase/exopolyphosphatase; InterPro IPR000644:IPR001667:IPR010766:IPR004097; KEGG: mem:Memar_0491 putative manganese-dependent inorganic pyrophosphatase; PFAM: Cystathionine beta-synthase, core; Phosphoesterase, RecJ-like; DRTGG; DHHA2; SMART: Cystathionine beta-synthase, core; SPTR: Inorganic diphosphatase.
    
 0.918
EJG06050.1
PFAM: V-type ATPase 116kDa subunit family; COGs: COG1269 H+-ATPase subunit I; InterPro IPR002490; KEGG: mhu:Mhun_1775 V-type ATPase, 116 kDa subunit; PFAM: ATPase, V0/A0 complex, 116kDa subunit; SPTR: V-type ATPase, 116 kDa subunit; Belongs to the V-ATPase 116 kDa subunit family.
    
 0.730
EJG08006.1
PFAM: V-type ATPase 116kDa subunit family; COGs: COG1269 H+-ATPase subunit I; InterPro IPR002490; KEGG: mem:Memar_0282 V-type ATP synthase subunit I; PFAM: ATPase, V0/A0 complex, 116kDa subunit; SPTR: V-type ATPase, 116 kDa subunit; Belongs to the V-ATPase 116 kDa subunit family.
    
 0.730
rpl4
50S ribosomal protein L4P; Forms part of the polypeptide exit tunnel.
  
 
 0.667
EJG08007.1
PFAM: ATP synthase subunit C; InterPro IPR002379; KEGG: mpl:Mpal_2681 H+transporting two-sector ATPase C subunit; PFAM: ATPase, F0/V0 complex, subunit C; SPTR: H+transporting two-sector ATPase C subunit.
   
 
 0.607
atpA
V-type ATP synthase alpha chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
    
 0.605
atpA-2
V-type ATP synthase alpha chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
    
 0.605
atpF
V-type ATP synthase subunit F; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
 0.604
atpC
V-type ATP synthase subunit C; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
 0.600
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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