STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG07161.1Adenylyl cyclase CyaB; PFAM: CYTH domain; TIGRFAM: adenylyl cyclase CyaB, putative; COGs: COG1437 Adenylate cyclase class 2 (thermophilic); InterPro IPR008172:IPR008173; KEGG: mpl:Mpal_1572 adenylyl cyclase CyaB; PFAM: Adenylate cyclase; SPTR: Adenylyl cyclase CyaB; TIGRFAM: Adenylyl cyclase CyaB. (173 aa)    
Predicted Functional Partners:
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.
 
  
  0.981
moaA
Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate; Belongs to the radical SAM superfamily. MoaA family.
 
  
  0.976
EJG07160.1
PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; COGs: COG1047 FKBP-type peptidyl-prolyl cis-trans isomerase 2; InterPro IPR001179; KEGG: mpl:Mpal_1571 peptidylprolyl isomerase FKBP-type; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; SPTR: Peptidylprolyl isomerase FKBP-type.
       0.727
EJG07305.1
Nuclear protein SET; PFAM: SET domain; COGs: COG2940 Proteins containing SET domain; InterPro IPR001214; KEGG: mem:Memar_0660 nuclear protein SET; SMART: SET; SPTR: Nuclear protein SET.
     
 0.624
EJG07516.1
KEGG: mem:Memar_2460 hypothetical protein; SPTR: Putative uncharacterized protein.
     
 0.618
EJG06316.1
PFAM: NUDIX domain; InterPro IPR000086; KEGG: mpi:Mpet_0609 NUDIX hydrolase; PFAM: NUDIX hydrolase domain; SPTR: NUDIX hydrolase.
 
  
 0.605
moaC
Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
 
  
  0.592
EJG07388.1
PFAM: Glutaredoxin; COGs: COG0695 Glutaredoxin and related protein; InterPro IPR002109; KEGG: mpi:Mpet_1341 glutaredoxin; PFAM: Glutaredoxin; SPTR: Glutaredoxin.
  
  
  0.576
EJG06808.1
PFAM: GTPase of unknown function; GTPase of unknown function C-terminal; TGS domain; COGs: COG0012 GTPase probable translation factor; InterPro IPR002917:IPR013646:IPR004095; KEGG: mem:Memar_1577 translation-associated GTPase; PFAM: GTPase of unknown function C-terminal; GTP-binding protein, HSR1-related; TGS; SPTR: Putative uncharacterized protein.
 
  
  0.573
EJG08357.1
PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; COGs: COG0127 Xanthosine triphosphate pyrophosphatase; InterPro IPR002637; KEGG: mpl:Mpal_0597 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; PFAM: Ham1-like protein; SPTR: Non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; TIGRFAM: Ham1-like protein; Belongs to the HAM1 NTPase family.
  
  
  0.572
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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