STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG07260.1ADP-ribosylation/Crystallin J1; PFAM: ADP-ribosylglycohydrolase; COGs: COG1397 ADP-ribosylglycohydrolase; InterPro IPR005502; KEGG: sat:SYN_02739 ADP-ribosylglycohydrolase; PFAM: ADP-ribosylation/Crystallin J1; SPTR: ADP-ribosylglycohydrolase. (305 aa)    
Predicted Functional Partners:
EJG07259.1
ATPase; PFAM: Archaeal ATPase; Archaea bacterial proteins of unknown function; COGs: COG1672 ATPase (AAA+ superfamily); InterPro IPR011579:IPR004256; KEGG: mem:Memar_0874 ATPase; SPTR: ATPase.
       0.773
EJG07258.1
PFAM: UvrD/REP helicase; COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); InterPro IPR000212; KEGG: mem:Memar_1498 UvrD/REP helicase; PFAM: DNA helicase, UvrD/REP type; SPTR: UvrD/REP helicase.
       0.720
EJG07257.1
COGs: COG3857 ATP-dependent nuclease subunit B; KEGG: mem:Memar_1499 ATP-dependent nuclease subunit B-like protein; SPTR: ATP-dependent nuclease subunit B-like protein.
       0.719
EJG06009.1
ADP-ribosylation/Crystallin J1; PFAM: ADP-ribosylglycohydrolase; COGs: COG1397 ADP-ribosylglycohydrolase; InterPro IPR005502; KEGG: mem:Memar_0150 ADP-ribosylation/crystallin J1; PFAM: ADP-ribosylation/Crystallin J1; SPTR: ADP-ribosylation/Crystallin J1.
  
     0.714
EJG06502.1
PFAM: Nitrogen regulatory protein P-II; COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187; KEGG: mpi:Mpet_0261 nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein PII; SPTR: Nitrogen regulatory protein P-II.
   
 
 0.640
EJG06503.1
PFAM: Nitrogen regulatory protein P-II; COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187; KEGG: mpi:Mpet_0262 nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein PII; SPTR: Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
   
 
 0.640
EJG08112.1
PFAM: Nitrogen regulatory protein P-II; COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187; KEGG: rci:RRC433 P-II family nitrogen regulator; PFAM: Nitrogen regulatory protein PII; SPTR: Putative nitrogen regulator (P-II family); Belongs to the P(II) protein family.
   
 
 0.640
EJG08122.1
PFAM: Nitrogen regulatory protein P-II; COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187; KEGG: mpl:Mpal_0014 nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein PII; SPTR: Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
   
 
 0.640
EJG07261.1
ATPase associated with various cellular activities AAA_5; PFAM: AAA domain (dynein-related subfamily); COGs: COG1401 GTPase subunit of restriction endonuclease; InterPro IPR003593:IPR011704; KEGG: fpl:Ferp_0864 ATPase associated with various cellular activities AAA_5; PFAM: ATPase associated with various cellular activities, AAA-5; SMART: ATPase, AAA+ type, core; SPTR: ATPase associated with various cellular activities AAA_5.
 
     0.620
EJG07262.1
PFAM: McrBC 5-methylcytosine restriction system component; COGs: COG4268 McrBC 5-methylcytosine restriction system component; InterPro IPR019292; KEGG: mhu:Mhun_1299 McrBC 5-methylcytosine restriction system component-like; PFAM: 5-methylcytosine restriction system component-like protein; SPTR: McrBC 5-methylcytosine restriction system component-like protein.
       0.569
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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