STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
EJG07261.1ATPase associated with various cellular activities AAA_5; PFAM: AAA domain (dynein-related subfamily); COGs: COG1401 GTPase subunit of restriction endonuclease; InterPro IPR003593:IPR011704; KEGG: fpl:Ferp_0864 ATPase associated with various cellular activities AAA_5; PFAM: ATPase associated with various cellular activities, AAA-5; SMART: ATPase, AAA+ type, core; SPTR: ATPase associated with various cellular activities AAA_5. (739 aa)    
Predicted Functional Partners:
EJG07262.1
PFAM: McrBC 5-methylcytosine restriction system component; COGs: COG4268 McrBC 5-methylcytosine restriction system component; InterPro IPR019292; KEGG: mhu:Mhun_1299 McrBC 5-methylcytosine restriction system component-like; PFAM: 5-methylcytosine restriction system component-like protein; SPTR: McrBC 5-methylcytosine restriction system component-like protein.
 
 
 0.999
EJG07975.1
PFAM: Type I restriction modification DNA specificity domain; COGs: COG0732 Restriction endonuclease S subunits; InterPro IPR000055; KEGG: kpn:KPN_pKPN4p07085 putative restriction endonuclease S subunit; PFAM: Restriction endonuclease, type I, S subunit, EcoBI; SPTR: Putative restriction endonuclease S subunit.
 
  
 0.777
EJG07260.1
ADP-ribosylation/Crystallin J1; PFAM: ADP-ribosylglycohydrolase; COGs: COG1397 ADP-ribosylglycohydrolase; InterPro IPR005502; KEGG: sat:SYN_02739 ADP-ribosylglycohydrolase; PFAM: ADP-ribosylation/Crystallin J1; SPTR: ADP-ribosylglycohydrolase.
 
     0.620
EJG07974.1
PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit; COGs: COG0610 Type I site-specific restriction-modification system R (restriction) subunit and related helicase; InterPro IPR014001:IPR007409:IPR006935; KEGG: dze:Dd1591_4250 hypothetical protein; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; SMART: DEAD-like helicase, N-terminal; SPTR: Putative uncharacterized protein.
 
  
 0.609
EJG07976.1
PFAM: N-6 DNA Methylase; HsdM N-terminal domain; COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR003356; KEGG: dpr:Despr_0254 N-6 DNA methylase; PFAM: DNA methylase, adenine-specific; SPTR: N-6 DNA methylase.
 
   
 0.583
EJG07258.1
PFAM: UvrD/REP helicase; COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); InterPro IPR000212; KEGG: mem:Memar_1498 UvrD/REP helicase; PFAM: DNA helicase, UvrD/REP type; SPTR: UvrD/REP helicase.
       0.528
EJG07259.1
ATPase; PFAM: Archaeal ATPase; Archaea bacterial proteins of unknown function; COGs: COG1672 ATPase (AAA+ superfamily); InterPro IPR011579:IPR004256; KEGG: mem:Memar_0874 ATPase; SPTR: ATPase.
       0.524
EJG06138.1
PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam); COGs: COG0338 Site-specific DNA methylase; InterPro IPR012327:IPR012326; KEGG: mpi:Mpet_0189 DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; SPTR: DNA adenine methylase; TIGRFAM: DNA adenine methylase.
 
     0.507
EJG07257.1
COGs: COG3857 ATP-dependent nuclease subunit B; KEGG: mem:Memar_1499 ATP-dependent nuclease subunit B-like protein; SPTR: ATP-dependent nuclease subunit B-like protein.
       0.491
EJG07256.1
PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; COGs: COG1201 Lhr-like helicase; InterPro IPR014001:IPR001650:IPR011545; KEGG: plm:Plim_1076 DEAD/DEAH box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: DEAD/DEAH box helicase domain protein; manually curated.
 
     0.488
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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