STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG07271.1PFAM: Protein of unknown function DUF55; COGs: COG1673 conserved hypothetical protein; HAMAP: UPF0310 protein; InterPro IPR002740; KEGG: mem:Memar_1478 hypothetical protein; PFAM: Uncharacterised protein family UPF0310; SPTR: Putative uncharacterized protein; Belongs to the UPF0310 family. (150 aa)    
Predicted Functional Partners:
EJG07270.1
COGs: COG3586 conserved hypothetical protein; KEGG: mmr:Mmar10_0164 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.805
EJG07272.1
PFAM: Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: TIGR02688 family protein; conserved hypothetical protein; COGs: COG4930 ATP-dependent Lon-type protease; InterPro IPR013473:IPR014061:IPR008269; KEGG: mhu:Mhun_1906 ATP-dependent protease La; PFAM: Peptidase S16, lon C-terminal; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02653, peptidase S16 non-peptidase homolog; Conserved hypothetical protein CHP02688.
 
     0.690
EJG07273.1
PglZ domain protein; InterPro IPR013973; KEGG: rpt:Rpal_1125 PglZ domain protein; PFAM: PglZ domain; SPTR: PglZ domain protein.
       0.648
EJG07274.1
PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative; COGs: COG0232 dGTP triphosphohydrolase; InterPro IPR006261:IPR003607:IPR006674; KEGG: toc:Toce_0512 deoxyguanosinetriphosphate triphosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region; SPTR: Deoxyguanosinetriphosphate triphosphohydrolase-like protein 1; TIGRFAM: Deoxyguanosinetriphosphate triphosphohydrolase.
       0.635
EJG07269.1
PFAM: Domain of unknown function (DUF365); COGs: COG2028 conserved hypothetical protein; InterPro IPR007176; KEGG: mem:Memar_1483 hypothetical protein; PFAM: Protein of unknown function DUF365; SPTR: Putative uncharacterized protein.
       0.584
EJG07194.1
Flagellar accessory protein FlaH; PFAM: KaiC; COGs: COG2874 ATPase involved in biogenesis of flagella; KEGG: mbn:Mboo_1343 flagellar accessory protein FlaH; SPTR: Putative flagellar protein FlaH.
  
     0.553
EJG07268.1
PFAM: Transcription factor TFIID (or TATA-binding protein, TBP); COGs: COG2101 TATA-box binding protein (TBP) component of TFIID and TFIIIB; InterPro IPR000814; KEGG: tba:TERMP_01858 TatA-box binding protein; PFAM: TATA-box binding; SPTR: Transcription factor TFIID (Or TATA-binding protein, TBP).
       0.545
EJG06141.1
KEGG: mpi:Mpet_2021 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.449
EJG07196.1
PFAM: Bacterial type II secretion system protein F domain; COGs: COG1955 flagella assembly protein J; InterPro IPR018076; KEGG: mem:Memar_0948 flagellar assembly protein J; PFAM: Type II secretion system F domain; SPTR: Type II secretion system protein.
  
     0.448
EJG07276.1
SMC domain protein; InterPro IPR003395; KEGG: cth:Cthe_1161 hypothetical protein; PFAM: RecF/RecN/SMC protein, N-terminal; SPTR: Putative uncharacterized protein.
       0.445
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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