STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG07279.1Hypothetical protein. (189 aa)    
Predicted Functional Partners:
EJG07277.1
Hypothetical protein; PFAM: Putative RNA methylase family UPF0020; Eco57I restriction endonuclease; KEGG: pph:Ppha_2038 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
EJG07278.1
KEGG: chy:CHY_2654 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
EJG07280.1
PFAM: Putative inner membrane protein (DUF1819); InterPro IPR014948; KEGG: dly:Dehly_1628 hypothetical protein; PFAM: Protein of unknown function DUF1819, putative inner membrane; SPTR: Putative uncharacterized protein.
       0.773
EJG07276.1
SMC domain protein; InterPro IPR003395; KEGG: cth:Cthe_1161 hypothetical protein; PFAM: RecF/RecN/SMC protein, N-terminal; SPTR: Putative uncharacterized protein.
       0.430
EJG07281.1
PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; COGs: COG1061 DNA or RNA helicase of superfamily II; InterPro IPR014001:IPR001650:IPR006935:IPR004155; KEGG: hla:Hlac_3022 type III restriction protein res subunit; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; DNA/RNA helicase, C-terminal; PBS lyase HEAT-like repeat; SMART: DNA/RNA helicase, C-terminal; DEAD-like helicase, N-terminal; SPTR: Type III restriction protein res subunit.
       0.419
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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