STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG07282.1PFAM: Uncharacterized protein conserved in bacteria C-term(DUF2220); KEGG: kol:Kole_1329 hypothetical protein; SPTR: Putative uncharacterized protein. (364 aa)    
Predicted Functional Partners:
EJG07285.1
Hypothetical protein; COGs: COG1196 Chromosome segregation ATPase; KEGG: csh:Closa_2780 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.939
EJG07283.1
KEGG: csh:Closa_2782 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
 
     0.924
EJG07284.1
KEGG: csh:Closa_2781 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.924
EJG07287.1
PFAM: Divergent AAA domain; COGs: COG2865 transcriptional regulator protein; InterPro IPR007421; KEGG: gur:Gura_2922 putative transcriptional regulator; PFAM: ATPase associated with various cellular activities, AAA-4; SPTR: Putative transcriptional regulator.
 
     0.512
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.