STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
corAMagnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family. (353 aa)    
Predicted Functional Partners:
EJG07313.1
Conserved hypothetical protein CHP00341; PFAM: Domain of unknown function (DUF389); TIGRFAM: uncharacterized hydrophobic domain; TIGR00341 family protein; COGs: COG1808 membrane protein; InterPro IPR013031:IPR005240; KEGG: mpi:Mpet_1713 hypothetical protein; PFAM: Protein of unknown function DUF389; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP00341.
 
     0.792
EJG07311.1
CoA-binding domain protein; PFAM: CoA binding domain; ATP-grasp domain; TIGRFAM: acetyl coenzyme A synthetase (ADP forming), alpha domain; COGs: COG1042 Acyl-CoA synthetase (NDP forming); InterPro IPR013650:IPR003781; KEGG: mem:Memar_2327 CoA-binding domain-containing protein; PFAM: CoA-binding; ATP-grasp fold, succinyl-CoA synthetase-type; SPTR: CoA-binding domain protein.
       0.773
EJG07310.1
PFAM: Elongation factor Tu domain 2; COGs: COG3276 Selenocysteine-specific translation elongation factor; InterPro IPR004161; KEGG: mbn:Mboo_2448 elongation factor Tu domain-containing protein; PFAM: Translation elongation factor EFTu/EF1A, domain 2; SPTR: Elongation factor Tu, domain 2 protein.
       0.546
EJG07365.1
PFAM: Uncharacterized protein family UPF0029; COGs: COG1739 conserved hypothetical protein; InterPro IPR001498; KEGG: mem:Memar_2485 hypothetical protein; PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; SPTR: Putative uncharacterized protein.
  
    0.487
srp19
Ribonucleoprotein complex SRP, Srp19 component; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP.
  
    0.453
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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