STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG07322.1Protein of unknown function UPF0153; PFAM: Uncharacterised protein family (UPF0153); InterPro IPR005358; KEGG: mpl:Mpal_2098 protein of unknown function UPF0153; PFAM: Uncharacterised protein family UPF0153; SPTR: Putative uncharacterized protein. (249 aa)    
Predicted Functional Partners:
EJG06974.1
PFAM: Major Facilitator Superfamily; InterPro IPR011701; KEGG: mpi:Mpet_1231 major facilitator superfamily protein; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1.
  
  
 0.700
EJG06770.1
PFAM: Uncharacterized protein conserved in archaea (DUF2150); COGs: COG4749 conserved hypothetical protein; InterPro IPR014518; KEGG: mpl:Mpal_2134 hypothetical protein; PFAM: Uncharacterised conserved protein UCP022079; SPTR: Putative uncharacterized protein.
  
     0.691
EJG06490.1
KEGG: mbn:Mboo_0601 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.686
EJG07636.1
Methanogenesis marker domain 9; PFAM: Dihydrouridine synthase (Dus); TIGRFAM: TIM-barrel protein, putative; putative methanogenesis marker domain 9; COGs: COG4008 metal-binding transcription factor; InterPro IPR017671; KEGG: mem:Memar_1729 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Putative methanogenesis marker domain 9.
 
     0.654
EJG07526.1
Hypothetical protein; PFAM: CARDB; KEGG: mem:Memar_1820 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.643
EJG07634.1
PFAM: Protein of unknown function (DUF447); COGs: COG2457 conserved hypothetical protein; InterPro IPR007386; KEGG: mpi:Mpet_0996 hypothetical protein; PFAM: Protein of unknown function DUF447; SPTR: Putative uncharacterized protein.
  
     0.638
EJG08344.1
PFAM: Oligosaccharyl transferase STT3 subunit; COGs: COG1287 membrane protein required for N-linked glycosylation; InterPro IPR003674; KEGG: mem:Memar_2235 oligosaccharyl transferase, STT3 subunit; PFAM: Oligosaccharyl transferase, STT3 subunit; SPTR: Oligosaccharyl transferase, STT3 subunit.
  
     0.632
EJG06076.1
KEGG: mem:Memar_0063 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.627
EJG08297.1
PFAM: OB-fold nucleic acid binding domain; COGs: COG1599 Single-stranded DNA-binding replication protein A (RPA) large (70 kD) subunit and related ssDNA-binding protein; InterPro IPR004365; KEGG: mhu:Mhun_2542 nucleic acid binding, OB-fold, tRNA/helicase-type; PFAM: Nucleic acid binding, OB-fold, tRNA/helicase-type; SPTR: Nucleic acid binding, OB-fold, tRNA/helicase-type.
  
     0.621
EJG07590.1
Hypothetical protein; COGs: COG1549 Queuine tRNA-ribosyltransferase contain PUA domain; KEGG: mla:Mlab_0587 hypothetical protein; SPTR: Queuine tRNA-ribosyltransferase containing PUA domain-like protein.
  
     0.594
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.