STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG07327.1PFAM: Protein of unknown function (DUF1538); InterPro IPR011435; KEGG: mhu:Mhun_0338 hypothetical protein; PFAM: Protein of unknown function DUF1538; SPTR: Putative uncharacterized protein; overlaps another CDS with the same product name. (243 aa)    
Predicted Functional Partners:
EJG07328.1
PFAM: Nitrogen regulatory protein P-II; InterPro IPR002187; KEGG: mhu:Mhun_0339 nitrogen regulatory protein P-II (GlnB, GlnK); PFAM: Nitrogen regulatory protein PII; SPTR: Nitrogen regulatory protein P-II.
 
     0.964
EJG07326.1
PFAM: Protein of unknown function (DUF1538); InterPro IPR011435; KEGG: mma:MM_0932 hypothetical protein; PFAM: Protein of unknown function DUF1538; SPTR: Putative uncharacterized protein; overlaps another CDS with the same product name.
 
    
0.873
EJG07329.1
PFAM: Sodium:neurotransmitter symporter family; COGs: COG0733 Na+-dependent transporter of the SNF family; InterPro IPR000175; KEGG: mem:Memar_1316 sodium:neurotransmitter symporter; PFAM: Sodium:neurotransmitter symporter; SPTR: Transporter.
       0.586
EJG07325.1
ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; COGs: COG0474 Cation transport ATPase; InterProIPR001757:IPR004014:IPR008250:IPR005834:IPR 006068; KEGG: mma:MM_0901 cation-transporting ATPase; PFAM: ATPase, P-type, ATPase-associated region; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-termina [...]
       0.520
EJG07324.1
KEGG: mem:Memar_2220 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.418
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.