STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG07336.1PFAM: ABC-2 type transporter; TIGRFAM: daunorubicin resistance ABC transporter membrane protein; InterPro IPR005942:IPR013525; KEGG: mem:Memar_0327 daunorubicin resistance ABC transporter, inner membrane subunit B; PFAM: ABC-2 type transporter; SPTR: Daunorubicin resistance ABC transporter, inner membrane subunit B; TIGRFAM: Daunorubicin resistance ABC transporter membrane protein. (249 aa)    
Predicted Functional Partners:
EJG07335.1
PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR005894:IPR003593:IPR003439; KEGG: mem:Memar_0328 daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Daunorubicin resistance ABC transporter ATPase subunit; TIGRFAM: Daunorubicin resistance ABC transporter ATP-binding subunit.
 
 
 0.979
EJG07334.1
PFAM: Transcriptional regulator PadR-like family; COGs: COG1695 transcriptional regulator protein; InterPro IPR005149; KEGG: mpi:Mpet_1510 PadR-like family transcriptional regulator; PFAM: Transcriptional regulator PadR N-terminal-like; SPTR: Transcriptional regulator, PadR-like family.
 
   
 0.879
EJG06276.1
PFAM: ABC transporter; TIGRFAM: ATP-binding ABC transporter family nodulation protein NodI; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: mem:Memar_0659 ABC transporter-related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter-related protein.
 
 
 0.843
EJG08142.1
PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439:IPR005894; KEGG: mem:Memar_0021 daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Daunorubicin resistance ABC transporter ATPase subunit; TIGRFAM: Daunorubicin resistance ABC transporter ATP-binding subunit.
 
 
 0.791
EJG08320.1
PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: mem:Memar_0809 ABC transporter-related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter-related protein.
 
 
 0.703
EJG08072.1
PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: mbn:Mboo_2285 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related.
 
 
 0.649
EJG06181.1
PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: mbn:Mboo_1289 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related.
 
 
 0.634
EJG08346.1
Methanogenesis marker protein 1; PFAM: YcaO-like family; TIGRFAM: uncharacterized domain; putative methanogenesis marker protein 1; bacteriocin biosynthesis docking scaffold, SagD family; COGs: COG1944 conserved hypothetical protein; InterPro IPR003776:IPR017667; KEGG: mem:Memar_2237 hypothetical protein; PFAM: YcaO-like; SPTR: Putative uncharacterized protein; TIGRFAM: Putative methanogenesis marker protein 1; YcaO-like.
  
  
 0.627
EJG06269.1
PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: mem:Memar_1411 ABC transporter-related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter-related protein.
 
 
 0.618
EJG06646.1
PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: mpl:Mpal_1654 MATE efflux family protein; PFAM: Multi antimicrobial extrusion protein MatE; SPTR: MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein MatE.
  
  
 0.609
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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