STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG07337.1KEGG: mem:Memar_0906 hypothetical protein; SPTR: Putative uncharacterized protein. (87 aa)    
Predicted Functional Partners:
EJG07338.1
KEGG: mbn:Mboo_0618 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.476
EJG07334.1
PFAM: Transcriptional regulator PadR-like family; COGs: COG1695 transcriptional regulator protein; InterPro IPR005149; KEGG: mpi:Mpet_1510 PadR-like family transcriptional regulator; PFAM: Transcriptional regulator PadR N-terminal-like; SPTR: Transcriptional regulator, PadR-like family.
       0.473
EJG07335.1
PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR005894:IPR003593:IPR003439; KEGG: mem:Memar_0328 daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Daunorubicin resistance ABC transporter ATPase subunit; TIGRFAM: Daunorubicin resistance ABC transporter ATP-binding subunit.
       0.473
EJG07336.1
PFAM: ABC-2 type transporter; TIGRFAM: daunorubicin resistance ABC transporter membrane protein; InterPro IPR005942:IPR013525; KEGG: mem:Memar_0327 daunorubicin resistance ABC transporter, inner membrane subunit B; PFAM: ABC-2 type transporter; SPTR: Daunorubicin resistance ABC transporter, inner membrane subunit B; TIGRFAM: Daunorubicin resistance ABC transporter membrane protein.
       0.473
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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