STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG07362.1UspA domain-containing protein; PFAM: Acetyltransferase (GNAT) family; Universal stress protein family; InterPro IPR006016:IPR000182; KEGG: mem:Memar_1433 GCN5-related N-acetyltransferase; PFAM: UspA; GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase. (427 aa)    
Predicted Functional Partners:
EJG08099.1
PFAM: GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003018:IPR003594; KEGG: mem:Memar_1707 GAF sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; GAF; SMART: ATP-binding region, ATPase-like; GAF; SPTR: GAF sensor signal transduction histidine kinase.
     
 0.902
EJG07363.1
PFAM: AhpC/TSA family; COGs: COG1225 Peroxiredoxin; InterPro IPR000866; KEGG: tam:Theam_0591 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen.
     
 0.683
EJG07361.1
PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family; COGs: COG2081 flavoprotein; InterPro IPR004792; KEGG: mem:Memar_2387 hypothetical protein; PFAM: HI0933-like protein; SPTR: HI0933 family protein; TIGRFAM: HI0933-like protein.
       0.531
EJG08283.1
KEGG: mem:Memar_2322 hypothetical protein; SPTR: Putative uncharacterized protein.
   
    0.505
EJG07106.1
methylated-DNA/protein- cysteinemethyltransferase; PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase; COGs: COG0350 Methylated DNA-protein cysteine methyltransferase; InterPro IPR014048; KEGG: mem:Memar_0790 methylated-DNA--protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; SPTR: Methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding.
  
    0.466
EJG06404.1
PFAM: von Willebrand factor type A domain; Bacterial Ig-like domain (group 1); InterPro IPR003344:IPR002035; KEGG: mem:Memar_0553 von Willebrand factor, type A; PFAM: Bacterial Ig-like, group 1; von Willebrand factor, type A; SMART: von Willebrand factor, type A; Bacterial Ig-like, group 1; SPTR: von Willebrand factor, type A.
  
     0.464
EJG06405.1
PFAM: von Willebrand factor type A domain; Bacterial Ig-like domain (group 1); InterPro IPR003344:IPR002035; KEGG: mem:Memar_0553 von Willebrand factor, type A; PFAM: von Willebrand factor, type A; Bacterial Ig-like, group 1; SMART: von Willebrand factor, type A; Bacterial Ig-like, group 1; SPTR: von Willebrand factor, type A.
  
     0.447
EJG07297.1
Hypothetical protein; COGs: COG3467 flavin-nucleotide-binding protein; KEGG: mem:Memar_1429 hypothetical protein; SPTR: Putative uncharacterized protein.
 
  
 0.438
EJG06760.1
PFAM: Domain of unknown function DUF87; COGs: COG0433 ATPase; InterPro IPR002789; KEGG: mbn:Mboo_0937 hypothetical protein; PFAM: Protein of unknown function DUF87; SPTR: Putative uncharacterized protein.
  
     0.423
EJG07360.1
PFAM: Nitroreductase family; TIGRFAM: SagB-type dehydrogenase domain; InterPro IPR020051:IPR000415; KEGG: mem:Memar_0355 nitroreductase; PFAM: Nitroreductase-like; SPTR: Nitroreductase; TIGRFAM: SagB-type dehydrogenase domain.
  
  
 0.422
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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