STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG07474.1PFAM: Phosphatidylglycerophosphatase A; TIGRFAM: alpha-ribazole phosphatase CobZ; COGs: COG1267 Phosphatidylglycerophosphatase A and related protein; InterPro IPR007686; KEGG: mbn:Mboo_0702 phosphatidylglycerophosphatase A; PFAM: Phosphatidylglycerophosphatase A; SPTR: Phosphatidylglycerophosphatase A. (147 aa)    
Predicted Functional Partners:
cobS
Cobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
    
  0.927
EJG07934.1
Phosphoesterase PA-phosphatase related protein; PFAM: PAP2 superfamily; InterPro IPR000326; KEGG: atm:ANT_23660 phosphatase; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase; SPTR: Phosphatase.
 
 
 0.766
EJG07473.1
UPF0284 protein; PFAM: Phosphoribosyltransferase; TIGRFAM: TIGR00303 family protein; COGs: COG2038 NaMN:DMB phosphoribosyltransferase; HAMAP: UPF0284 protein; InterPro IPR002805:IPR003200; KEGG: mpl:Mpal_1548 hypothetical protein; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like, core; SPTR: UPF0284 protein Mpal_1548; TIGRFAM:Nicotinate-nucleotide- dimethylbenzimidazole phosphoribosyltransferase, putative; Belongs to the UPF0284 family.
       0.730
cobD
Cobalamin biosynthesis protein cbiB; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
    
  0.699
EJG06871.1
5-deoxyadenosylcobinamide phosphate nucleotidyltransferase; TIGRFAM: TIGR00454 family protein; COGs: COG2266 GTP:adenosylcobinamide-phosphate guanylyltransferase; KEGG: mem:Memar_1446 5-deoxyadenosylcobinamide phosphate nucleotidyltransferase; SPTR: Molybdenum cofactor guanylyltransferase.
 
     0.688
EJG07476.1
Nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; COGs: COG2221 Dissimilatory sulfite reductase (desulfoviridin) alpha and beta subunits; InterPro IPR005117:IPR006067:IPR001450; KEGG: mem:Memar_0732 nitrite and sulphite reductase 4Fe-4S region; PFAM: Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; Nitrite/sulphite reductase 4Fe-4S region; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Nitrite and sulphite reductase 4 [...]
       0.665
EJG06252.1
Phospholipase D/transphosphatidylase; COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; InterPro IPR001736; KEGG: mem:Memar_2448 phospholipase D/transphosphatidylase; SPTR: Phospholipase D/Transphosphatidylase.
     
 0.653
EJG07823.1
PFAM: CDP-alcohol phosphatidyltransferase; COGs: COG0558 Phosphatidylglycerophosphate synthase; InterPro IPR000462; KEGG: mem:Memar_1904 CDP-alcohol phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.652
EJG07857.1
PFAM: CDP-alcohol phosphatidyltransferase; COGs: COG0558 Phosphatidylglycerophosphate synthase; InterPro IPR000462; KEGG: mem:Memar_1397 CDP-alcohol phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.652
thiL
Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.
 
  
 0.627
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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