STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG07484.1PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: mem:Memar_0724 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, family 2. (236 aa)    
Predicted Functional Partners:
EJG07485.1
PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein; COGs: COG0392 integral membrane protein; InterPro IPR005242; KEGG: mem:Memar_0723 hypothetical protein; SPTR: Putative uncharacterized protein.
     0.995
EJG07483.1
Amine oxidase; PFAM: Flavin containing amine oxidoreductase; COGs: COG1232 Protoporphyrinogen oxidase; InterPro IPR002937; KEGG: mem:Memar_0725 hypothetical protein; PFAM: Amine oxidase; SPTR: Amine oxidase.
 
    0.966
EJG07486.1
PFAM: Uncharacterized membrane protein (DUF2298); TIGRFAM: Chlor_Arch_YYY domain; COGs: COG5427 Uncharacterized membrane protein; InterPro IPR018746; KEGG: mem:Memar_0722 hypothetical protein; PFAM: YYY membrane protein; SPTR: Putative uncharacterized protein; TIGRFAM: YYY membrane protein.
 
  
 0.958
EJG07227.1
PFAM: Glycosyl transferase family 2; InterPro IPR001173; KEGG: mem:Memar_1662 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, family 2.
 
 
 0.843
EJG06714.1
PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: mem:Memar_2396 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, family 2; overlaps another CDS with the same product name.
 
 
 0.840
EJG06017.1
PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: mem:Memar_2396 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, family 2.
 
 
 0.836
cetZ
Tubulin/FtsZ GTPase; Involved in cell shape control; Belongs to the CetZ family.
 
   
 0.745
EJG07481.1
KEGG: mpl:Mpal_0517 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.681
EJG06830.1
PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: mhu:Mhun_3161 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, family 2.
 
 
 0.652
rpl7ae
50S ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.
       0.555
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.