STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG07486.1PFAM: Uncharacterized membrane protein (DUF2298); TIGRFAM: Chlor_Arch_YYY domain; COGs: COG5427 Uncharacterized membrane protein; InterPro IPR018746; KEGG: mem:Memar_0722 hypothetical protein; PFAM: YYY membrane protein; SPTR: Putative uncharacterized protein; TIGRFAM: YYY membrane protein. (658 aa)    
Predicted Functional Partners:
EJG07483.1
Amine oxidase; PFAM: Flavin containing amine oxidoreductase; COGs: COG1232 Protoporphyrinogen oxidase; InterPro IPR002937; KEGG: mem:Memar_0725 hypothetical protein; PFAM: Amine oxidase; SPTR: Amine oxidase.
 
    0.992
EJG07485.1
PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein; COGs: COG0392 integral membrane protein; InterPro IPR005242; KEGG: mem:Memar_0723 hypothetical protein; SPTR: Putative uncharacterized protein.
 
  
 0.976
EJG07484.1
PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: mem:Memar_0724 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, family 2.
 
  
 0.958
EJG07870.1
PFAM: 4Fe-4S binding domain; COGs: COG2768 Uncharacterized Fe-S center protein; InterPro IPR001450; KEGG: rci:RRC203 2(4Fe-4S) ferredoxin-domain-containing protein; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: 2(4Fe-4S) ferredoxin-domain protein.
   
    0.857
EJG06976.1
Ribonuclease III; PFAM: RNase3 domain; Double-stranded RNA binding motif; COGs: COG0571 dsRNA-specific ribonuclease; InterPro IPR000999:IPR001159; KEGG: mem:Memar_0367 ribonuclease III; PFAM: Ribonuclease III; Double-stranded RNA binding; SMART: Ribonuclease III; Double-stranded RNA binding; SPTR: RNAse III.
  
    0.852
EJG07480.1
Conserved hypothetical protein CHP03663; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase; TIGRFAM: TIGR03663 family protein; COGs: COG4745 membrane-bound mannosyltransferase; InterPro IPR019962; KEGG: mem:Memar_0728 glycosyl transferase family protein; SPTR: Glycosyl transferase, family 39; TIGRFAM: Conserved hypothetical protein CHP03663.
 
     0.835
EJG07564.1
Amine oxidase; PFAM: Flavin containing amine oxidoreductase; COGs: COG1232 Protoporphyrinogen oxidase; InterPro IPR002937; KEGG: mpl:Mpal_0942 amine oxidase; PFAM: Amine oxidase; SPTR: Amine oxidase.
 
    0.804
cetZ
Tubulin/FtsZ GTPase; Involved in cell shape control; Belongs to the CetZ family.
 
     0.717
EJG07526.1
Hypothetical protein; PFAM: CARDB; KEGG: mem:Memar_1820 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.598
EJG06076.1
KEGG: mem:Memar_0063 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.594
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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