STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG07523.1KEGG: mpi:Mpet_1654 hypothetical protein; SPTR: Putative uncharacterized protein. (118 aa)    
Predicted Functional Partners:
ade
Adenine deaminase; PFAM: Amidohydrolase family; TIGRFAM: adenine deaminase; COGs: COG1001 Adenine deaminase; HAMAP: Adenine deaminase; InterPro IPR006679:IPR006680; KEGG: mbn:Mboo_1575 adenine deaminase; PFAM: Amidohydrolase 1; SPTR: Adenine deaminase; TIGRFAM: Adenine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.
       0.801
EJG07525.1
Methanogenesis marker protein 8; PFAM: Uncharacterized protein conserved in archaea (DUF2099); TIGRFAM: putative methanogenesis marker protein 8; COGs: COG4022 conserved hypothetical protein; InterPro IPR009181; KEGG: mem:Memar_1536 hypothetical protein; PFAM: Uncharacterised conserved protein UCP004929, methanogenesis; SPTR: Putative uncharacterized protein; TIGRFAM: Uncharacterised conserved protein UCP004929, methanogenesis.
       0.773
EJG07522.1
Small GTP-binding protein; PFAM: Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; COGs: COG2229 GTPase; InterPro IPR005225:IPR002917; KEGG: mem:Memar_2190 small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; SPTR: Small GTP-binding protein; TIGRFAM: Small GTP-binding protein.
       0.603
EJG07526.1
Hypothetical protein; PFAM: CARDB; KEGG: mem:Memar_1820 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.487
EJG07527.1
PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: mem:Memar_1821 ABC transporter-related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter-related protein.
       0.478
EJG07528.1
Protein of unknown function DUF214; PFAM: Predicted permease; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: mem:Memar_1822 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative uncharacterized protein.
       0.478
EJG07521.1
KEGG: mem:Memar_1548 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.402
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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