STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG07576.1PFAM: ATPase family associated with various cellular activities (AAA); COGs: COG0714 MoxR-like ATPase; InterPro IPR011703:IPR003593; KEGG: mpl:Mpal_0818 ATPase associated with various cellular activities AAA_3; PFAM: ATPase associated with various cellular activities, AAA-3; SMART: ATPase, AAA+ type, core; SPTR: ATPase associated with various cellular activities AAA_3. (324 aa)    
Predicted Functional Partners:
EJG07577.1
PFAM: Protein of unknown function DUF58; COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: mem:Memar_2402 hypothetical protein; PFAM: Protein of unknown function DUF58; SPTR: Putative uncharacterized protein.
  
  
 0.850
EJG07574.1
KEGG: mpl:Mpal_0385 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.798
EJG07575.1
KEGG: mem:Memar_0684 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.798
EJG07579.1
KEGG: mem:Memar_2404 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.786
EJG07578.1
Hypothetical protein.
       0.773
EJG07573.1
KEGG: mem:Memar_2398 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.752
EJG07433.1
PFAM: Orn/Lys/Arg decarboxylase, C-terminal domain; Orn/Lys/Arg decarboxylase, N-terminal domain; Orn/Lys/Arg decarboxylase, major domain; COGs: COG1982 Arginine/lysine/ornithine decarboxylase; InterPro IPR005308:IPR000310:IPR008286; KEGG: mem:Memar_1269 lysine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase, N-terminal; Orn/Lys/Arg decarboxylase, C-terminal; SPTR: Lysine decarboxylase.
   
 
 0.693
EJG07788.1
PFAM: von Willebrand factor type A domain; TIGRFAM: N-terminal double-transmembrane domain; InterPro IPR002035:IPR011933; KEGG: mpl:Mpal_1806 hypothetical protein; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; SPTR: Putative uncharacterized protein; TIGRFAM: Double-transmembrane region, N-terminal.
 
 
 0.673
EJG07787.1
PFAM: Protein of unknown function DUF58; COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: mpl:Mpal_1807 protein of unknown function DUF58; PFAM: Protein of unknown function DUF58; SPTR: Putative uncharacterized protein.
  
 0.644
EJG07455.1
PFAM: CobN/Magnesium Chelatase; TIGRFAM: cobaltochelatase, CobN subunit; COGs: COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatase; InterPro IPR003672; KEGG: mpi:Mpet_0623 cobaltochelatase; PFAM: CobN/magnesium chelatase; SPTR: Magnesium chelatase family protein.
     
 0.556
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.