STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG07578.1Hypothetical protein. (155 aa)    
Predicted Functional Partners:
EJG07574.1
KEGG: mpl:Mpal_0385 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
EJG07575.1
KEGG: mem:Memar_0684 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
EJG07576.1
PFAM: ATPase family associated with various cellular activities (AAA); COGs: COG0714 MoxR-like ATPase; InterPro IPR011703:IPR003593; KEGG: mpl:Mpal_0818 ATPase associated with various cellular activities AAA_3; PFAM: ATPase associated with various cellular activities, AAA-3; SMART: ATPase, AAA+ type, core; SPTR: ATPase associated with various cellular activities AAA_3.
       0.773
EJG07577.1
PFAM: Protein of unknown function DUF58; COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: mem:Memar_2402 hypothetical protein; PFAM: Protein of unknown function DUF58; SPTR: Putative uncharacterized protein.
       0.773
EJG07579.1
KEGG: mem:Memar_2404 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
EJG07573.1
KEGG: mem:Memar_2398 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.752
EJG07572.1
KEGG: mem:Memar_1377 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.525
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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