STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG07597.1PFAM: GHMP kinases N terminal domain; COGs: COG1829 kinase (sugar kinase superfamily); InterPro IPR006204; KEGG: mem:Memar_1235 GHMP kinase; PFAM: GHMP kinase; SPTR: Pantothenate kinase. (286 aa)    
Predicted Functional Partners:
EJG07598.1
PFAM: Protein of unknown function DUF137; COGs: COG1701 conserved hypothetical protein; InterPro IPR002855; KEGG: mem:Memar_1234 hypothetical protein; PFAM: Protein of unknown function DUF137; SPTR: Pantothenate synthetase.
 
  
 0.999
EJG07347.1
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
 
  
 0.988
EJG07105.1
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
 
  
 0.984
EJG07596.1
PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic; COGs: COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase; InterPro IPR005252:IPR003382:IPR007085; KEGG: mem:Memar_1236 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: Flavoprotein; DNA/pantothenate metabolism flavoprotein, C-terminal; SPTR: Phosphopantothenate-cysteine ligase; TIGRFAM: Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase.
 
   
 0.980
EJG07594.1
PFAM: NMD3 family; COGs: COG1499 NMD protein affecting ribosome stability and mRNA decay; InterPro IPR007064; KEGG: mem:Memar_1238 hypothetical protein; PFAM: NMD3; SPTR: Nmd3.
 
     0.968
EJG07593.1
PFAM: Protein of unknown function (DUF424); COGs: COG2412 conserved hypothetical protein; InterPro IPR007355; KEGG: mem:Memar_1239 hypothetical protein; PFAM: Protein of unknown function DUF424; SPTR: Putative uncharacterized protein.
 
     0.961
EJG07595.1
Protein of unknown function Met10; PFAM: Met-10+ like-protein; COGs: COG2520 methyltransferase; InterPro IPR003402; KEGG: mbn:Mboo_1668 protein of unknown function Met10; PFAM: Protein of unknown function Met10; SPTR: Putative uncharacterized protein.
 
     0.954
EJG07599.1
PFAM: Replication factor C; COGs: COG2812 DNA polymerase III gamma/tau subunits; InterPro IPR013748; KEGG: mem:Memar_1233 replication factor C small subunit 2; PFAM: Replication factor C; SPTR: Replication factor C.
 
     0.953
htpX
Protease htpX; PFAM: Peptidase family M48; COGs: COG0501 Zn-dependent protease with chaperone function; HAMAP: protease htpX; InterPro IPR001915; KEGG: mpl:Mpal_0594 heat shock protein HtpX; PFAM: Peptidase M48, Ste24p; SPTR: Protease HtpX homolog; Belongs to the peptidase M48B family.
  
    0.868
EJG06342.1
PFAM: Cobalamin-independent synthase, Catalytic domain; COGs: COG0620 Methionine synthase II (cobalamin-independent); InterPro IPR002629; KEGG: mem:Memar_2152 methionine synthase; PFAM: Methionine synthase, vitamin-B12 independent; SPTR: Methionine synthase (B12-independent).
 
    0.840
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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