STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG07625.1PFAM: Uncharacterised protein family (UPF0150); COGs: COG1598 conserved hypothetical protein; InterPro IPR005357; KEGG: afu:AF1072 hypothetical protein; PFAM: Uncharacterised protein family UPF0150; SPTR: UPF0150 protein AF_1072. (71 aa)    
Predicted Functional Partners:
EJG07626.1
PFAM: YcfA-like protein; COGs: COG1724 periplasmic or secreted lipoprotein; InterPro IPR012933; KEGG: mac:MA4126 hypothetical protein; PFAM: YcfA-like; SPTR: Putative uncharacterized protein; manually curated.
 
 
 
 0.976
EJG06774.1
PFAM: YcfA-like protein; InterPro IPR012933; KEGG: mar:MAE_40080 YcfA family protein; PFAM: YcfA-like; SPTR: YcfA family protein; manually curated.
 
 
 
 0.894
EJG06710.1
PFAM: YcfA-like protein; COGs: COG1724 periplasmic or secreted lipoprotein; InterPro IPR012933; KEGG: mta:Moth_0298 YcfA-like; PFAM: YcfA-like; SPTR: YcfA-like protein.
 
     0.673
EJG07627.1
KEGG: mpi:Mpet_1793 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.661
EJG07618.1
PFAM: YcfA-like protein; InterPro IPR012933; KEGG: mem:Memar_0546 YcfA family protein; PFAM: YcfA-like; SPTR: YcfA family protein.
   
 
 0.648
EJG07619.1
PFAM: Uncharacterised protein family (UPF0150); InterPro IPR005357; KEGG: mma:MM_0031 hypothetical protein; PFAM: Uncharacterised protein family UPF0150; SPTR: Putative uncharacterized protein.
  
     0.573
EJG07628.1
PFAM: Protein of unknown function (DUF1628); KEGG: mpl:Mpal_2415 protein of unknown function DUF1628; SPTR: Putative uncharacterized protein.
       0.503
EJG07616.1
PFAM: Uncharacterised protein family (UPF0150); InterPro IPR005357; KEGG: mhu:Mhun_0712 hypothetical protein; PFAM: Uncharacterised protein family UPF0150; SPTR: Putative uncharacterized protein.
  
     0.415
EJG06711.1
PFAM: Uncharacterised protein family (UPF0150); COGs: COG1598 conserved hypothetical protein; InterPro IPR005357; KEGG: mar:MAE_09130 hypothetical protein; PFAM: Uncharacterised protein family UPF0150; SPTR: Toxin-antitoxin system, antitoxin component, HicB family.
  
     0.410
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.