STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG07646.1PFAM: 4Fe-4S binding domain; COGs: COG1149 MinD superfamily P-loop ATPase containing an inserted ferredoxin domain; InterPro IPR001450; KEGG: mem:Memar_0902 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: 4Fe-4S ferredoxin, iron-sulfur binding domain protein. (281 aa)    
Predicted Functional Partners:
EJG06070.1
Cupin 2 conserved barrel domain protein; PFAM: Cupin domain; InterPro IPR013096; KEGG: nde:NIDE3914 hypothetical protein; PFAM: Cupin 2, conserved barrel; SPTR: Putative uncharacterized protein.
  
    0.869
EJG07297.1
Hypothetical protein; COGs: COG3467 flavin-nucleotide-binding protein; KEGG: mem:Memar_1429 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.816
EJG07645.1
PFAM: Cupin domain; COGs: COG0662 Mannose-6-phosphate isomerase; InterPro IPR013096; KEGG: mem:Memar_0905 cupin 2 domain-containing protein; PFAM: Cupin 2, conserved barrel; SPTR: Cupin 2, conserved barrel domain protein.
  
    0.717
EJG07928.1
PFAM: Pyridoxamine 5'-phosphate oxidase; COGs: COG3467 flavin-nucleotide-binding protein; InterPro IPR011576; KEGG: kcr:Kcr_0386 pyridoxamine 5'-phosphate oxidase-related FMN-binding; PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; SPTR: Pyridoxamine 5'-phosphate oxidase-related FMN-binding; manually curated.
   
    0.649
EJG08064.1
PFAM: NADPH-dependent FMN reductase; COGs: COG0655 Multimeric flavodoxin WrbA; InterPro IPR005025; KEGG: mpi:Mpet_0277 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase; SPTR: NADPH-dependent FMN reductase.
   
    0.544
EJG07647.1
Catalase related subgroup domain-containing protein; PFAM: Catalase; Catalase-related immune-responsive; COGs: COG0753 Catalase; InterPro IPR018028:IPR010582; KEGG: dvl:Dvul_3018 catalase; PFAM: Catalase related subgroup; Catalase-related immune responsive; SPTR: Catalase; Belongs to the catalase family.
       0.528
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
 
    0.472
EJG07067.1
Protein of unknown function CGGC region; PFAM: CGGC domain; COGs: COG5561 metal-binding protein; InterPro IPR014925; KEGG: dsy:DSY0626 hypothetical protein; PFAM: Protein of unknown function, CGGC domain; SPTR: Putative uncharacterized protein.
 
     0.465
EJG06194.1
COGs: COG0348 Polyferredoxin; InterPro IPR001450; KEGG: mem:Memar_1206 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
   
    0.461
EJG07707.1
PFAM: Protein of unknown function (DUF473); COGs: COG1935 conserved hypothetical protein; InterPro IPR007417; KEGG: mbn:Mboo_1928 hypothetical protein; PFAM: Protein of unknown function DUF473; SPTR: Putative uncharacterized protein.
   
    0.430
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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