STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG07652.1PFAM: von Willebrand factor type A domain; Bacterial Ig-like domain (group 1); InterPro IPR003344:IPR002035; KEGG: mem:Memar_0553 von Willebrand factor, type A; PFAM: von Willebrand factor, type A; Bacterial Ig-like, group 1; SMART: von Willebrand factor, type A; Bacterial Ig-like, group 1; SPTR: von Willebrand factor, type A. (1011 aa)    
Predicted Functional Partners:
EJG06356.1
PFAM: Condensation domain; COGs: COG4908 Uncharacterized protein containing a NRPS condensation (elongation) domain; InterPro IPR001242; KEGG: mem:Memar_0898 condensation domain-containing protein; PFAM: Condensation domain; SPTR: Condensation domain protein.
  
     0.647
EJG07204.1
KEGG: mbn:Mboo_1333 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.571
EJG07781.1
PFAM: PEGA domain; Protein of unknown function (DUF3344); InterPro IPR013229; KEGG: mpi:Mpet_0024 PEGA domain-containing protein; PFAM: PEGA; SPTR: PEGA domain protein.
  
     0.529
EJG06401.1
Hypothetical protein; PFAM: PEGA domain; KEGG: mpi:Mpet_0397 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.515
EJG06725.1
PFAM: Polysaccharide biosynthesis protein; COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: mem:Memar_0954 polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein; SPTR: Polysaccharide biosynthesis protein.
  
     0.496
EJG07768.1
KEGG: mem:Memar_0639 PKD domain-containing protein; SPTR: PKD domain containing protein.
  
     0.479
EJG08183.1
PFAM: PBS lyase HEAT-like repeat; InterPro IPR004155; KEGG: mem:Memar_2476 heat repeat-containing PBS lyase; PFAM: PBS lyase HEAT-like repeat; SPTR: PBS lyase HEAT domain protein repeat-containing protein.
  
     0.469
EJG07456.1
PFAM: PEGA domain; InterPro IPR013229; KEGG: mpi:Mpet_0024 PEGA domain-containing protein; PFAM: PEGA; SPTR: PEGA domain protein.
  
     0.460
EJG07529.1
Forkhead-associated protein; PFAM: FHA domain; InterPro IPR000253; KEGG: mem:Memar_1770 FHA domain-containing protein; PFAM: Forkhead-associated; SMART: Forkhead-associated; SPTR: Transcriptional regulator, ArsR family.
  
     0.457
EJG08182.1
PAS sensor protein; PFAM: PAS fold; TIGRFAM: PAS domain S-box; InterPro IPR000014:IPR013656; KEGG: mem:Memar_2475 putative PAS/PAC sensor protein; PFAM: PAS fold-4; SMART: PAS; SPTR: Putative PAS/PAC sensor protein; TIGRFAM: PAS.
  
     0.455
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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