STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG07791.1KEGG: mpl:Mpal_1803 hypothetical protein; SPTR: Putative uncharacterized protein. (269 aa)    
Predicted Functional Partners:
EJG07790.1
KEGG: mla:Mlab_0256 periplasmic binding protein; SPTR: Putative uncharacterized protein.
       0.789
EJG07792.1
KEGG: mla:Mlab_0258 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.789
EJG07793.1
Sigma 54 interacting domain protein; PFAM: ABC transporter; COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003593:IPR003439; KEGG: mpl:Mpal_1801 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related.
       0.789
EJG07794.1
ABC-type transporter, integral membrane subunit; PFAM: Cobalt transport protein; COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR003339; KEGG: mpl:Mpal_1800 cobalt transport protein; PFAM: Cobalt transport protein; SPTR: Cobalt transport protein.
       0.742
EJG07786.1
PFAM: ATPase family associated with various cellular activities (AAA); COGs: COG0714 MoxR-like ATPase; InterPro IPR003593:IPR011703; KEGG: mhu:Mhun_0601 ATPase; PFAM: ATPase associated with various cellular activities, AAA-3; SMART: ATPase, AAA+ type, core; SPTR: ATPase associated with various cellular activities, AAA_3.
       0.516
EJG07788.1
PFAM: von Willebrand factor type A domain; TIGRFAM: N-terminal double-transmembrane domain; InterPro IPR002035:IPR011933; KEGG: mpl:Mpal_1806 hypothetical protein; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; SPTR: Putative uncharacterized protein; TIGRFAM: Double-transmembrane region, N-terminal.
       0.516
EJG07789.1
KEGG: mpl:Mpal_1805 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.516
EJG07787.1
PFAM: Protein of unknown function DUF58; COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: mpl:Mpal_1807 protein of unknown function DUF58; PFAM: Protein of unknown function DUF58; SPTR: Putative uncharacterized protein.
       0.508
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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