STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG07793.1Sigma 54 interacting domain protein; PFAM: ABC transporter; COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003593:IPR003439; KEGG: mpl:Mpal_1801 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related. (482 aa)    
Predicted Functional Partners:
EJG07794.1
ABC-type transporter, integral membrane subunit; PFAM: Cobalt transport protein; COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR003339; KEGG: mpl:Mpal_1800 cobalt transport protein; PFAM: Cobalt transport protein; SPTR: Cobalt transport protein.
 
 0.986
EJG06549.1
ABC-type transporter, integral membrane subunit; PFAM: Cobalt transport protein; COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR003339; KEGG: mpi:Mpet_2246 cobalt transport protein; PFAM: Cobalt transport protein; SPTR: Cobalt transport protein.
 
 0.949
EJG07241.1
PFAM: BioY family; COGs: COG1268 conserved hypothetical protein; InterPro IPR003784; KEGG: mbn:Mboo_1788 BioY protein; PFAM: BioY protein; SPTR: BioY protein.
 
 
 0.904
EJG07866.1
PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ; COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR012809:IPR003339; KEGG: mem:Memar_1405 cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: Cobalt transport protein; SPTR: Cobalt ABC transporter, inner membrane subunit CbiQ; TIGRFAM: Cobalt ABC transporter CbiQ, permease subunit.
  
 0.883
EJG07895.1
PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ; COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR012809:IPR003339; KEGG: mpl:Mpal_1704 cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: Cobalt transport protein; SPTR: Cobalt ABC transporter, inner membrane subunit CbiQ; TIGRFAM: Cobalt ABC transporter CbiQ, permease subunit.
  
 0.865
EJG07790.1
KEGG: mla:Mlab_0256 periplasmic binding protein; SPTR: Putative uncharacterized protein.
       0.789
EJG07791.1
KEGG: mpl:Mpal_1803 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.789
EJG07792.1
KEGG: mla:Mlab_0258 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.789
EJG07863.1
Cobalamin (vitamin B12) biosynthesis CbiM protein; PFAM: Cobalt uptake substrate-specific transmembrane region; TIGRFAM: cobalamin biosynthesis protein CbiM; COGs: COG0310 ABC-type Co2+ transport system permease component; InterPro IPR002751; KEGG: mhu:Mhun_1480 cobalt transport protein CbiM; PFAM: Cobalamin (vitamin B12) biosynthesis CbiM; SPTR: Cobalamin (Vitamin B12) biosynthesis CbiM protein.
  
 0.747
EJG07864.1
KEGG: mpi:Mpet_1870 cobalt transport protein CbiN; SPTR: Cobalt transport protein CbiN.
  
 0.747
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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