STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG07796.1PFAM: Nitrogenase component 1 type Oxidoreductase; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510; KEGG: mbn:Mboo_2082 oxidoreductase/nitrogenase, component 1; PFAM: Nitrogenase/oxidoreductase, component 1; SPTR: Oxidoreductase/nitrogenase, component 1; overlaps another CDS with the same product name. (347 aa)    
Predicted Functional Partners:
EJG07797.1
PFAM: 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; TIGRFAM: nitrogenase iron protein; COGs: COG1348 Nitrogenase subunit NifH (ATPase); InterPro IPR000392; KEGG: mem:Memar_1937 nitrogenase; PFAM: Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL; SPTR: Nitrogenase iron protein; Belongs to the NifH/BchL/ChlL family.
 0.994
EJG07795.1
PFAM: Nitrogenase component 1 type Oxidoreductase; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510; KEGG: mbn:Mboo_2081 oxidoreductase/nitrogenase, component 1; PFAM: Nitrogenase/oxidoreductase, component 1; SPTR: Oxidoreductase/nitrogenase, component 1; overlaps another CDS with the same product name.
 
0.981
EJG06500.1
PFAM: Nitrogenase component 1 type Oxidoreductase; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510; KEGG: mpi:Mpet_0259 nitrogenase molybdenum-iron protein beta chain; PFAM: Nitrogenase/oxidoreductase, component 1; SPTR: Nitrogenase molybdenum-iron protein beta chain; Belongs to the NifD/NifK/NifE/NifN family.
 
 0.980
nifH
Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
 0.968
EJG06501.1
Nitrogenase molybdenum-iron protein alpha chain; PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase component I, alpha chain; nitrogenase molybdenum-iron protein alpha chain; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR005972:IPR010143:IPR000510; KEGG: mpi:Mpet_0260 nitrogenase molybdenum-iron protein alpha chain; PFAM: Nitrogenase/oxidoreductase, component 1; SPTR: Nitrogenase protein alpha chain; TIGRFAM: Nitrogenase molybdenum-iron protein alpha chain; Nitrogenase component 1, alpha chain.
 
 
 
0.938
EJG06503.1
PFAM: Nitrogen regulatory protein P-II; COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187; KEGG: mpi:Mpet_0262 nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein PII; SPTR: Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
 
 
 0.923
EJG06524.1
PFAM: Radical SAM superfamily; TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197:IPR006638; KEGG: mem:Memar_0654 radical SAM domain-containing protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Radical SAM domain protein.
 
  
 0.734
EJG08116.1
PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I; COGs: COG0174 Glutamine synthetase; InterPro IPR008147:IPR008146:IPR004809; KEGG: mem:Memar_0335 glutamine synthetase, type I; PFAM: Glutamine synthetase, catalytic region; Glutamine synthetase, beta-Grasp; SPTR: L-glutamine synthetase; TIGRFAM: Glutamine synthetase type I.
   
 
 0.634
EJG07798.1
PFAM: Cation transport protein; COGs: COG0168 Trk-type K+ transport systems membrane components; InterPro IPR003445; KEGG: mem:Memar_1935 cation transporter; PFAM: Cation transporter; SPTR: Cation transporter.
       0.601
EJG07802.1
Rubredoxin-type Fe(Cys)4 protein; Rubredoxin is a small nonheme, iron protein lacking acid- labile sulfide. Its single Fe, chelated to 4 Cys, functions as an electron acceptor and may also stabilize the conformation of the molecule.
    
 0.559
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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