STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG07911.1KEGG: mem:Memar_0292 hypothetical protein; SPTR: Putative uncharacterized protein. (68 aa)    
Predicted Functional Partners:
EJG07912.1
Cell division ATPase MinD; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: cell division ATPase MinD, archaeal; COGs: COG0455 ATPase involved in chromosome partitioning; InterPro IPR010224:IPR002586; KEGG: mbn:Mboo_1911 cell division ATPase MinD; PFAM: Cobyrinic acid a,c-diamide synthase; SPTR: Cell division ATPase MinD; TIGRFAM: ATPase, cell division-type, MinD.
       0.797
EJG07913.1
KEGG: mpi:Mpet_2724 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.651
EJG07914.1
KEGG: mem:Memar_1013 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.639
EJG07910.1
PFAM: Protein of unknown function DUF89; COGs: COG1578 conserved hypothetical protein; InterPro IPR002791; KEGG: mem:Memar_0291 hypothetical protein; PFAM: Domain of unknown function DUF89; SPTR: Putative uncharacterized protein.
       0.443
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.