STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG07928.1PFAM: Pyridoxamine 5'-phosphate oxidase; COGs: COG3467 flavin-nucleotide-binding protein; InterPro IPR011576; KEGG: kcr:Kcr_0386 pyridoxamine 5'-phosphate oxidase-related FMN-binding; PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; SPTR: Pyridoxamine 5'-phosphate oxidase-related FMN-binding; manually curated. (153 aa)    
Predicted Functional Partners:
EJG07708.1
Conserved hypothetical protein CHP00061; PFAM: PAC2 family; TIGRFAM: TIGR00161 family protein; COGs: COG1938 protein of ATP-grasp superfamily; InterPro IPR004425:IPR002766; KEGG: mpl:Mpal_0692 protein of unknown function DUF75; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP00061.
   
    0.773
EJG07707.1
PFAM: Protein of unknown function (DUF473); COGs: COG1935 conserved hypothetical protein; InterPro IPR007417; KEGG: mbn:Mboo_1928 hypothetical protein; PFAM: Protein of unknown function DUF473; SPTR: Putative uncharacterized protein.
   
    0.685
EJG07646.1
PFAM: 4Fe-4S binding domain; COGs: COG1149 MinD superfamily P-loop ATPase containing an inserted ferredoxin domain; InterPro IPR001450; KEGG: mem:Memar_0902 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
   
    0.649
EJG07927.1
PFAM: Protein of unknown function (DUF475); COGs: COG2899 conserved hypothetical protein; InterPro IPR007427; KEGG: mpi:Mpet_1125 hypothetical protein; PFAM: Protein of unknown function DUF475; SPTR: Putative uncharacterized protein.
       0.580
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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