STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG07938.1Glutaredoxin; KEGG: mbn:Mboo_1708 glutaredoxin; SPTR: Glutaredoxin. (89 aa)    
Predicted Functional Partners:
EJG08067.1
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 0.992
EJG07937.1
TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; COGs: COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase; InterPro IPR012833; KEGG: mem:Memar_0320 anaerobic ribonucleoside-triphosphate reductase; SPTR: Anaerobic ribonucleoside-triphosphate reductase; TIGRFAM: Ribonucleoside-triphosphate reductase, anaerobic.
    
 0.925
msrA
Peptide methionine sulfoxide reductase msrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
 
 0.800
EJG07936.1
PFAM: Putative pyruvate format-lyase activating enzyme (DUF1786); COGs: COG4012 conserved hypothetical protein; InterPro IPR014846; KEGG: mem:Memar_0319 pyruvate formate-lyase activating enzyme; PFAM: Protein of unknown function DUF1786, putative pyruvate format-lyase activating enzyme; SPTR: Pyruvate formate-lyase activating enzyme.
       0.774
EJG08020.1
PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027; KEGG: mbn:Mboo_2329 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
 0.692
EJG08257.1
Glutaredoxin-like protein, YruB-family; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Glutaredoxin; TIGRFAM: thioredoxin-disulfide reductase; Glutaredoxin-like protein, YruB-family; COGs: COG3634 Alkyl hydroperoxide reductase large subunit; InterPro IPR002109:IPR013027:IPR011911; KEGG: mbn:Mboo_0084 glutaredoxin; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Glutaredoxin; SPTR: Glutaredoxin; TIGRFAM: Glutaredoxin-like protein, YruB.
   
 0.691
EJG06884.1
PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family; COGs: COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); InterPro IPR013651; KEGG: mem:Memar_1015 RimK domain-containing protein ATP-grasp; PFAM: ATP-grasp fold, RimK-type; SPTR: SSU ribosomal protein S6P modification protein.
    
 0.651
tmk
PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase; COGs: COG0125 Thymidylate kinase; HAMAP: Thymidylate kinase; InterPro IPR000062:IPR018094; KEGG: mem:Memar_1571 thymidylate kinase; PFAM: Thymidylate kinase-like; SPTR: Probable thymidylate kinase; TIGRFAM: Thymidylate kinase.
    
 0.576
EJG07413.1
PFAM: Phosphoadenosine phosphosulfate reductase family; COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase; InterPro IPR002500; KEGG: mpl:Mpal_1512 aminotransferase class V; PFAM: Phosphoadenosine phosphosulphate reductase; SPTR: Aminotransferase class V.
   
 
 0.573
EJG08382.1
PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase family protein; COGs: COG0520 Selenocysteine lyase; InterPro IPR000192; KEGG: mem:Memar_0881 aminotransferase, class V; PFAM: Aminotransferase, class V/Cysteine desulfurase; SPTR: Aminotransferase, class V.
   
 
 0.573
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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