Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EJG07958.1PFAM: Domain of unknown function DUF87; COGs: COG0433 ATPase; InterPro IPR003593:IPR002789; KEGG: bph:Bphy_0246 hypothetical protein; PFAM: Protein of unknown function DUF87; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein. (350 aa)    
Predicted Functional Partners:
EJG06761.1
NurA domain-containing protein; PFAM: NurA domain; InterPro IPR018977; KEGG: mem:Memar_1618 hypothetical protein; PFAM: NurA domain; SPTR: Putative uncharacterized protein.
   
 
 0.795
EJG07957.1
Hypothetical protein.
       0.636
infB
Translation initiation factor aIF-2; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2.
   
   0.574
EJG06843.1
Protein of unknown function DUF100; PFAM: Fructose-1,6-bisphosphatase; COGs: COG1980 fructose 1 6-bisphosphatase; InterPro IPR002803; KEGG: mbn:Mboo_1612 hypothetical protein; PFAM: Fructose-1,6-bisphosphatase, class V; SPTR: Putative uncharacterized protein.
 
     0.484
rps17e
PFAM: Ribosomal S17; COGs: COG1383 Ribosomal protein S17E; HAMAP: Ribosomal protein S17e; InterPro IPR001210; KEGG: mem:Memar_1459 30S ribosomal protein S17e; PFAM: Ribosomal protein S17e; SPTR: 30S ribosomal protein S17e; Belongs to the eukaryotic ribosomal protein eS17 family.
       0.471
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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