Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EJG07959.1PFAM: PKD domain; COGs: COG3291 FOG: PKD repeat; InterPro IPR000601; KEGG: mhu:Mhun_2840 PKD; PFAM: PKD; SMART: PKD; SPTR: PKD. (272 aa)    
Predicted Functional Partners:
EJG07960.1
Hypothetical protein; KEGG: mhu:Mhun_2442 PKD; SPTR: PKD.
    
  0.976
EJG07501.1
PFAM: YycH protein; KEGG: mbn:Mboo_1423 PKD domain-containing protein; SPTR: PKD domain containing protein; manually curated.
     
  0.970
EJG07124.1
PFAM: PKD domain; COGs: COG3291 FOG: PKD repeat; InterPro IPR000601; KEGG: mac:MA4297 cell surface protein; PFAM: PKD; SMART: PKD; SPTR: Cell surface protein.
  
  
 
0.946
EJG07767.1
Parallel beta-helix repeat protein; PFAM: Periplasmic copper-binding protein (NosD); PKD domain; TIGRFAM: parallel beta-helix repeat (two copies); COGs: COG3291 FOG: PKD repeat; InterPro IPR000601:IPR007742:IPR006626; KEGG: mhu:Mhun_0644 periplasmic copper-binding; PFAM: PKD; Periplasmic copper-binding; SMART: PKD; Parallel beta-helix repeat; SPTR: Periplasmic copper-binding protein; TIGRFAM: parallel beta-helix repeat.
  
  
 
0.923
EJG07447.1
APHP domain protein; PFAM: Protein of unknown function (DUF3344); CARDB; InterPro IPR011635; KEGG: mac:MA1766 cell surface protein; PFAM: APHP; SPTR: Cell surface protein.
 
  
  0.922
EJG07451.1
Cell surface glycoprotein; PFAM: Protein of unknown function (DUF3344); KEGG: mpi:Mpet_0021 cell surface glycoprotein; SPTR: Cell surface glycoprotein.
    
  0.912
EJG06451.1
Hypothetical protein; KEGG: fpl:Ferp_2079 prenyltransferase/squalene oxidase; SPTR: Prenyltransferase/squalene oxidase.
     
  0.861
EJG07961.1
KEGG: mem:Memar_0550 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.762
EJG07126.1
PFAM: PKD domain; COGs: COG3291 FOG: PKD repeat; InterPro IPR000601; KEGG: mac:MA1764 cell surface protein; PFAM: PKD; SMART: PKD; SPTR: Cell surface protein.
  
  
 
0.633
EJG06605.1
PFAM: Protein of unknown function (DUF1628); PA14 domain; PKD domain; COGs: COG3291 FOG: PKD repeat; InterPro IPR000601:IPR011658:IPR006558:IPR012859; KEGG: mpi:Mpet_0741 PKD domain-containing protein; PFAM: PKD; Protein of unknown function DUF1628; PA14; SMART: PKD; PA14; LamG-like jellyroll fold; SPTR: PKD domain containing protein.
  
  
 
0.612
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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