STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG07967.1KEGG: mpi:Mpet_2675 hypothetical protein; SPTR: Putative uncharacterized protein. (59 aa)    
Predicted Functional Partners:
EJG07968.1
PFAM: Helix-turn-helix; Domain of unknown function (DUF955); COGs: COG2856 Zn peptidase; InterPro IPR001387:IPR010359; KEGG: bts:Btus_2240 protein of unknown function DUF955; PFAM: Protein of unknown function DUF955; Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein.
       0.554
EJG07969.1
KEGG: mbt:JTY_2529 hypothetical protein; SPTR: Putative uncharacterized protein Mb2543c; manually curated.
       0.554
EJG07965.1
KEGG: mem:Memar_1743 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.518
EJG07966.1
PFAM: Protein of unknown function (DUF3467); KEGG: mem:Memar_1744 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.518
EJG07970.1
KEGG: dar:Daro_0796 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.470
EJG07964.1
KEGG: mem:Memar_1742 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.407
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.