STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG07975.1PFAM: Type I restriction modification DNA specificity domain; COGs: COG0732 Restriction endonuclease S subunits; InterPro IPR000055; KEGG: kpn:KPN_pKPN4p07085 putative restriction endonuclease S subunit; PFAM: Restriction endonuclease, type I, S subunit, EcoBI; SPTR: Putative restriction endonuclease S subunit. (466 aa)    
Predicted Functional Partners:
EJG07974.1
PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit; COGs: COG0610 Type I site-specific restriction-modification system R (restriction) subunit and related helicase; InterPro IPR014001:IPR007409:IPR006935; KEGG: dze:Dd1591_4250 hypothetical protein; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; SMART: DEAD-like helicase, N-terminal; SPTR: Putative uncharacterized protein.
 
  
 0.999
EJG07976.1
PFAM: N-6 DNA Methylase; HsdM N-terminal domain; COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR003356; KEGG: dpr:Despr_0254 N-6 DNA methylase; PFAM: DNA methylase, adenine-specific; SPTR: N-6 DNA methylase.
 
 0.999
EJG07261.1
ATPase associated with various cellular activities AAA_5; PFAM: AAA domain (dynein-related subfamily); COGs: COG1401 GTPase subunit of restriction endonuclease; InterPro IPR003593:IPR011704; KEGG: fpl:Ferp_0864 ATPase associated with various cellular activities AAA_5; PFAM: ATPase associated with various cellular activities, AAA-5; SMART: ATPase, AAA+ type, core; SPTR: ATPase associated with various cellular activities AAA_5.
 
  
 0.777
EJG06175.1
PFAM: Divergent AAA domain; COGs: COG2865 transcriptional regulator protein; InterPro IPR007421; KEGG: mem:Memar_0667 putative transcriptional regulator; PFAM: ATPase associated with various cellular activities, AAA-4; SPTR: Putative transcriptional regulator.
 
    0.732
EJG07287.1
PFAM: Divergent AAA domain; COGs: COG2865 transcriptional regulator protein; InterPro IPR007421; KEGG: gur:Gura_2922 putative transcriptional regulator; PFAM: ATPase associated with various cellular activities, AAA-4; SPTR: Putative transcriptional regulator.
  
    0.696
EJG07956.1
COGs: COG2865 transcriptional regulator protein; KEGG: cli:Clim_1467 putative transcriptional regulator; SPTR: Putative transcriptional regulator.
  
    0.696
EJG07262.1
PFAM: McrBC 5-methylcytosine restriction system component; COGs: COG4268 McrBC 5-methylcytosine restriction system component; InterPro IPR019292; KEGG: mhu:Mhun_1299 McrBC 5-methylcytosine restriction system component-like; PFAM: 5-methylcytosine restriction system component-like protein; SPTR: McrBC 5-methylcytosine restriction system component-like protein.
 
  
 0.635
EJG07277.1
Hypothetical protein; PFAM: Putative RNA methylase family UPF0020; Eco57I restriction endonuclease; KEGG: pph:Ppha_2038 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 0.566
EJG08299.1
PFAM: Resolvase, N terminal domain; Helix-turn-helix domain of resolvase; InterPro IPR006119:IPR006120; KEGG: mem:Memar_2357 resolvase domain-containing protein; PFAM: Resolvase, helix-turn-helix region; Resolvase, N-terminal; SPTR: Resolvase helix-turn-helix domain protein.
  
  
 0.514
infB
Translation initiation factor aIF-2; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2.
   
 
 0.512
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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