Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rps6ePFAM: Ribosomal protein S6e; COGs: COG2125 Ribosomal protein S6E (S10); HAMAP: 30S ribosomal protein S6e; InterPro IPR001377; KEGG: mbn:Mboo_2295 30S ribosomal protein S6e; PFAM: Ribosomal protein S6e; SPTR: 30S ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family. (132 aa)    
Predicted Functional Partners:
rps19p
Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
  
 0.999
rps3
Ribosomal protein S3; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.
  
 0.999
rps4e
PFAM: S4 domain; Ribosomal family S4e; RS4NT (NUC023) domain; COGs: COG1471 Ribosomal protein S4E; HAMAP: 30S ribosomal protein S4e; InterPro IPR013843:IPR002942:IPR013845:IPR005824; KEGG: mpi:Mpet_2200 30S ribosomal protein S4E, central domain-containing protein; PFAM: Ribosomal protein S4e, central; Ribosomal protein S4e, N-terminal; RNA-binding S4; KOW; SMART: KOW; RNA-binding S4; SPTR: Ribosomal protein S4E, central domain protein; Belongs to the eukaryotic ribosomal protein eS4 family.
  
 0.999
rps2
PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein Sa(cytosolic)/S2(archaeal); COGs: COG0052 Ribosomal protein S2; InterPro IPR001865:IPR005707; KEGG: mbn:Mboo_2215 30S ribosomal protein S2; PFAM: Ribosomal protein S2; SPTR: 30S ribosomal protein S2P; TIGRFAM: Ribosomal protein S2, eukaryotic/archaeal; Belongs to the universal ribosomal protein uS2 family.
  
 0.999
rps17e
PFAM: Ribosomal S17; COGs: COG1383 Ribosomal protein S17E; HAMAP: Ribosomal protein S17e; InterPro IPR001210; KEGG: mem:Memar_1459 30S ribosomal protein S17e; PFAM: Ribosomal protein S17e; SPTR: 30S ribosomal protein S17e; Belongs to the eukaryotic ribosomal protein eS17 family.
  
 0.999
rpl7ae
50S ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.
 
 0.999
rps28e
PFAM: Ribosomal protein S28e; COGs: COG2053 Ribosomal protein S28E/S33; HAMAP: 30S ribosomal protein S28e; InterPro IPR000289; KEGG: mpl:Mpal_0524 30S ribosomal protein S28e; PFAM: Ribosomal protein S28e; SPTR: 30S ribosomal protein S28e; Belongs to the eukaryotic ribosomal protein eS28 family.
  
 0.999
rps19e
Ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.
  
 0.999
rps15
PFAM: Ribosomal S13/S15 N-terminal domain; Ribosomal protein S15; COGs: COG0184 Ribosomal protein S15P/S13E; InterPro IPR012606:IPR000589; KEGG: mpi:Mpet_2006 ribosomal S13S15 domain-containing protein; PFAM: Ribosomal protein S13/S15, N-terminal; Ribosomal protein S15; SPTR: 30S ribosomal protein S15P/S13e.
 
 0.999
rps24e
PFAM: Ribosomal protein S24e; COGs: COG2004 Ribosomal protein S24E; HAMAP: 30S ribosomal protein S24e; InterPro IPR001976; KEGG: mem:Memar_2245 ribosomal protein S24e; PFAM: Ribosomal protein S24e; SPTR: SSU ribosomal protein S24E; Belongs to the eukaryotic ribosomal protein eS24 family.
 
 0.999
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.