Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EJG08070.1Hypothetical protein; COGs: COG1668 ABC-type Na+ efflux pump permease component; KEGG: mem:Memar_0393 hypothetical protein; SPTR: Putative uncharacterized protein. (357 aa)    
Predicted Functional Partners:
EJG08071.1
KEGG: mbn:Mboo_2286 abortive infection protein; SPTR: Abortive infection protein.
       0.942
EJG08072.1
PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: mbn:Mboo_2285 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related.
 
 
 0.928
EJG07607.1
Flagellin domain protein; PFAM: Protein of unknown function (DUF1628); TIGRFAM: archaeal flagellin N-terminal-like domain; InterPro IPR013373:IPR012859; KEGG: mem:Memar_1218 hypothetical protein; PFAM: Protein of unknown function DUF1628; SPTR: Putative uncharacterized protein; TIGRFAM: Archaeal flagellin, N-terminal related.
  
     0.627
EJG06883.1
Protein of unknown function UPF0058; PFAM: Uncharacterised protein family UPF0058; COGs: COG1745 metal-binding protein; InterPro IPR002753; KEGG: mem:Memar_1016 hypothetical protein; PFAM: Uncharacterised protein family UPF0058; SPTR: Putative uncharacterized protein.
  
     0.616
EJG07554.1
PFAM: Bacterial regulatory protein, arsR family; InterPro IPR001845; KEGG: mbn:Mboo_1266 regulatory protein, ArsR; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Regulatory protein, ArsR.
 
     0.613
EJG08024.1
S-layer-like domain-containing protein; PFAM: NPCBM-associated, NEW3 domain of alpha-galactosidase; COGs: COG1361 S-layer domain; KEGG: mem:Memar_0486 S-layer-like domain-containing protein; SPTR: S-layer domain-like protein.
  
     0.610
EJG07196.1
PFAM: Bacterial type II secretion system protein F domain; COGs: COG1955 flagella assembly protein J; InterPro IPR018076; KEGG: mem:Memar_0948 flagellar assembly protein J; PFAM: Type II secretion system F domain; SPTR: Type II secretion system protein.
  
     0.602
EJG08393.1
Methyl-accepting chemotaxis sensory transducer with Cache sensor; PFAM: Cache domain; HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR013163:IPR003660:IPR004089; KEGG: mem:Memar_0239 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; Cache, type 2; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SPTR: Methyl-accepting chemotaxis sensory transducer.
  
  
 0.581
EJG06117.1
PFAM: Kinase binding protein CGI-121; InterPro IPR007510; KEGG: mem:Memar_2502 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.559
EJG08002.1
PFAM: Bacterial type II secretion system protein F domain; COGs: COG1955 flagella assembly protein J; InterPro IPR018076; KEGG: mbn:Mboo_2354 type II secretion system protein; PFAM: Type II secretion system F domain; SPTR: Type II secretion system protein.
 
     0.558
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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