STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG08077.1PFAM: PRC-barrel domain; COGs: COG1873 conserved hypothetical protein; InterPro IPR007903; KEGG: mem:Memar_0401 PRC-barrel domain-containing protein; PFAM: PRC-barrel; SPTR: PRC-barrel domain protein. (89 aa)    
Predicted Functional Partners:
EJG08078.1
Protein of unknown function DUF549; PFAM: tRNAHis guanylyltransferase; COGs: COG4021 conserved hypothetical protein; InterPro IPR007537; KEGG: mem:Memar_0402 hypothetical protein; PFAM: tRNAHis guanylyltransferase; SPTR: tRNA(His)-5'-guanylyltransferase.
       0.932
EJG08249.1
PFAM: Protein of unknown function (DUF552); COGs: COG2450 conserved hypothetical protein; InterPro IPR012426; KEGG: mpl:Mpal_0398 protein of unknown function DUF1621; PFAM: Protein of unknown function DUF1621; SPTR: Putative uncharacterized protein.
  
    0.765
EJG07316.1
PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstC; phosphate ABC transporter, permease protein PstA; COGs: COG0573 ABC-type phosphate transport system permease component; InterPro IPR011864:IPR005672:IPR000515; KEGG: mpi:Mpet_1485 phosphate ABC transporter inner membrane subunit PstC; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Phosphate ABC transporter, inner membrane subunit PstC; TIGRFAM: Phosphate ABC transporter, permease protein PstC; Phosphate transport system [...]
       0.744
EJG07820.1
PFAM: Protein of unknown function (DUF1119); COGs: COG3389 conserved hypothetical protein; InterPro IPR006639:IPR010545; KEGG: mem:Memar_1924 hypothetical protein; PFAM: Protein of unknown function DUF1119, archaea; SMART: Peptidase A22, presenilin signal peptide; SPTR: Putative uncharacterized protein.
  
     0.742
EJG06094.1
TIGRFAM: signal peptidase I, archaeal type; InterPro IPR001733; KEGG: mem:Memar_0046 peptidase S26B, signal peptidase; SPTR: Peptidase S26B, signal peptidase; TIGRFAM: Peptidase S26B, eukaryotic signal peptidase.
  
     0.738
EJG06998.1
COGs: COG3390 conserved hypothetical protein; KEGG: mem:Memar_1249 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.735
EJG07816.1
PFAM: PRC-barrel domain; InterPro IPR007903; KEGG: mpl:Mpal_0042 PRC-barrel domain protein; PFAM: PRC-barrel; SPTR: PRC-barrel domain protein.
  
     0.731
EJG07760.1
PFAM: RNA polymerase Rpb4; COGs: COG1460 conserved hypothetical protein; InterPro IPR005574; KEGG: mpl:Mpal_0548 RNA polymerase Rpb4; PFAM: RNA polymerase II, Rpb4; SPTR: RNA polymerase Rpb4.
 
     0.721
EJG06867.1
Putative phosphoserine phosphatase; COGs: COG1340 Uncharacterized coiled-coil protein; KEGG: mbn:Mboo_1403 putative phosphoserine phosphatase; SPTR: Putative phosphoserine phosphatase.
  
     0.719
EJG08298.1
COGs: COG3390 conserved hypothetical protein; KEGG: mpl:Mpal_0023 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.718
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.