STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG08142.1PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439:IPR005894; KEGG: mem:Memar_0021 daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Daunorubicin resistance ABC transporter ATPase subunit; TIGRFAM: Daunorubicin resistance ABC transporter ATP-binding subunit. (317 aa)    
Predicted Functional Partners:
EJG08141.1
PFAM: ABC-2 type transporter; COGs: COG0842 ABC-type multidrug transport system permease component; InterPro IPR013525; KEGG: mpi:Mpet_0432 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: ABC-2 type transporter.
 
 
 0.971
EJG06270.1
PFAM: ABC-2 type transporter; COGs: COG1277 ABC-type transport system involved in multi-copper enzyme maturation permease component; KEGG: mem:Memar_1412 ABC-2 type transporter; SPTR: ABC-2 type transporter.
  
 0.890
EJG07336.1
PFAM: ABC-2 type transporter; TIGRFAM: daunorubicin resistance ABC transporter membrane protein; InterPro IPR005942:IPR013525; KEGG: mem:Memar_0327 daunorubicin resistance ABC transporter, inner membrane subunit B; PFAM: ABC-2 type transporter; SPTR: Daunorubicin resistance ABC transporter, inner membrane subunit B; TIGRFAM: Daunorubicin resistance ABC transporter membrane protein.
 
 
 0.791
EJG06277.1
PFAM: ABC-2 type transporter; TIGRFAM: ABC-2 type transporter, NodJ family; InterPro IPR013525; KEGG: mem:Memar_0658 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: ABC-2 type transporter.
 
 
 0.721
EJG08143.1
PFAM: Sulfate transporter family; STAS domain; COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR011547:IPR002645; KEGG: bmq:BMQ_4024 putative sulfate transporter; PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Putative sulfate transporter.
       0.634
EJG06646.1
PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: mpl:Mpal_1654 MATE efflux family protein; PFAM: Multi antimicrobial extrusion protein MatE; SPTR: MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein MatE.
  
  
 0.583
EJG08321.1
KEGG: mpl:Mpal_2703 cytochrome c-type biogenesis protein CcmB; SPTR: Putative ABC transporter, permease protein.
  
 
 0.514
EJG07334.1
PFAM: Transcriptional regulator PadR-like family; COGs: COG1695 transcriptional regulator protein; InterPro IPR005149; KEGG: mpi:Mpet_1510 PadR-like family transcriptional regulator; PFAM: Transcriptional regulator PadR N-terminal-like; SPTR: Transcriptional regulator, PadR-like family.
 
  
 0.472
rps3
Ribosomal protein S3; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.
  
 
   0.445
EJG08144.1
UspA domain-containing protein; PFAM: Universal stress protein family; InterPro IPR006016; KEGG: ppm:PPSC2_c0729 UspA domain protein; PFAM: UspA; SPTR: YxiE.
     
 0.433
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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