STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG08147.1KEGG: mma:MM_3151 hypothetical protein; SPTR: Putative uncharacterized protein. (193 aa)    
Predicted Functional Partners:
EJG08148.1
(NiFe) hydrogenase maturation protein HypF; PFAM: HypF finger; yrdC domain; Acylphosphatase; TIGRFAM: [NiFe] hydrogenase maturation protein HypF; COGs: COG0068 Hydrogenase maturation factor; InterPro IPR001792:IPR011125:IPR006070:IPR004421; KEGG: mem:Memar_0417 (NiFe) hydrogenase maturation protein HypF; PFAM: Sua5/YciO/YrdC, N-terminal; Acylphosphatase-like; Zinc finger, HypF-type; SPTR: (NiFe) hydrogenase maturation protein HypF; TIGRFAM: Hydrogenase maturation factor, HypF-type.
       0.681
EJG08149.1
PFAM: ArsR transcriptional regulator; COGs: COG4860 conserved hypothetical protein; InterPro IPR014517; KEGG: mbn:Mboo_2245 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.555
EJG08150.1
PFAM: MarR family; COGs: COG1497 transcriptional regulator protein; InterPro IPR001808:IPR000835; KEGG: mbn:Mboo_2244 helix-turn-helix, type 11 domain-containing protein; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, Crp; SPTR: Helix-turn-helix, type 11 domain protein.
       0.483
EJG08151.1
PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; COGs: COG1202 Superfamily II helicase; InterPro IPR014001:IPR001650:IPR011545; KEGG: mem:Memar_0420 DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: DEAD/DEAH box helicase domain protein.
       0.483
EJG06275.1
TM2 domain-containing protein; PFAM: TM2 domain; KEGG: mpi:Mpet_2113 TM2 domain-containing protein; SPTR: TM2 domain containing protein.
  
     0.425
EJG06804.1
Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase; InterPro IPR004843; KEGG: mbn:Mboo_1728 metallophosphoesterase; PFAM: Metallophosphoesterase; SPTR: Metallophosphoesterase.
  
     0.423
EJG07062.1
Hypothetical protein; PFAM: Uncharacterised ArCR, COG2043; KEGG: mbn:Mboo_2259 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.413
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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