STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG08183.1PFAM: PBS lyase HEAT-like repeat; InterPro IPR004155; KEGG: mem:Memar_2476 heat repeat-containing PBS lyase; PFAM: PBS lyase HEAT-like repeat; SPTR: PBS lyase HEAT domain protein repeat-containing protein. (185 aa)    
Predicted Functional Partners:
EJG07950.1
PFAM: PBS lyase HEAT-like repeat; InterPro IPR004155; KEGG: atm:ANT_27180 hypothetical protein; PFAM: PBS lyase HEAT-like repeat; SPTR: Putative uncharacterized protein.
  
     0.739
EJG06875.1
PFAM: HEAT repeat; InterPro IPR004155; KEGG: rrs:RoseRS_4600 heat repeat-containing PBS lyase; PFAM: PBS lyase HEAT-like repeat; SPTR: PBS lyase HEAT domain protein repeat-containing protein.
  
     0.737
EJG06203.1
PFAM: PBS lyase HEAT-like repeat; InterPro IPR004155; KEGG: mbn:Mboo_0125 heat repeat-containing PBS lyase; PFAM: PBS lyase HEAT-like repeat; SPTR: PBS lyase HEAT domain protein repeat-containing protein.
  
     0.730
EJG07307.1
PFAM: PBS lyase HEAT-like repeat; InterPro IPR004155; KEGG: rrs:RoseRS_3392 heat repeat-containing PBS lyase; PFAM: PBS lyase HEAT-like repeat; SMART: PBS lyase HEAT-like repeat; SPTR: PBS lyase HEAT domain protein repeat-containing protein.
  
     0.671
EJG06350.1
PBS lyase HEAT domain protein repeat-containing protein; PFAM: HEAT repeat; COGs: COG1413 FOG: HEAT repeat; InterPro IPR000357:IPR004155; KEGG: san:gbs2074 hypothetical protein; PFAM: PBS lyase HEAT-like repeat; HEAT; SPTR: Putative uncharacterized protein gbs2074.
  
     0.668
EJG08182.1
PAS sensor protein; PFAM: PAS fold; TIGRFAM: PAS domain S-box; InterPro IPR000014:IPR013656; KEGG: mem:Memar_2475 putative PAS/PAC sensor protein; PFAM: PAS fold-4; SMART: PAS; SPTR: Putative PAS/PAC sensor protein; TIGRFAM: PAS.
 
     0.623
EJG06405.1
PFAM: von Willebrand factor type A domain; Bacterial Ig-like domain (group 1); InterPro IPR003344:IPR002035; KEGG: mem:Memar_0553 von Willebrand factor, type A; PFAM: von Willebrand factor, type A; Bacterial Ig-like, group 1; SMART: von Willebrand factor, type A; Bacterial Ig-like, group 1; SPTR: von Willebrand factor, type A.
  
     0.562
EJG06701.1
PFAM: PBS lyase HEAT-like repeat; InterPro IPR004155; KEGG: mbn:Mboo_0822 heat repeat-containing PBS lyase; PFAM: PBS lyase HEAT-like repeat; SPTR: PBS lyase HEAT domain protein repeat-containing protein.
  
     0.561
EJG06402.1
Polymorphic outer membrane protein; PFAM: von Willebrand factor type A domain; InterPro IPR003368:IPR002035; KEGG: mem:Memar_0553 von Willebrand factor, type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; SPTR: von Willebrand factor, type A; TIGRFAM: Polymorphic membrane protein, Chlamydia.
  
     0.506
EJG06404.1
PFAM: von Willebrand factor type A domain; Bacterial Ig-like domain (group 1); InterPro IPR003344:IPR002035; KEGG: mem:Memar_0553 von Willebrand factor, type A; PFAM: Bacterial Ig-like, group 1; von Willebrand factor, type A; SMART: von Willebrand factor, type A; Bacterial Ig-like, group 1; SPTR: von Willebrand factor, type A.
  
     0.476
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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