STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG08210.1PFAM: Protein of unknown function (DUF3089); KEGG: mla:Mlab_1707 DNA repair and recombination protein RadA; SPTR: Putative uncharacterized protein. (348 aa)    
Predicted Functional Partners:
EJG08209.1
PFAM: Protein of unknown function (DUF3089); KEGG: mpi:Mpet_2157 hypothetical protein; SPTR: Putative uncharacterized protein.
 
    
0.795
EJG08186.1
Hypothetical protein; TIGRFAM: Chlamydial polymorphic outer membrane protein repeat; KEGG: mla:Mlab_1452 hypothetical protein; SPTR: Putative anti-sigma regulatory factor, serine/threonine protein kinase.
  
     0.551
EJG07783.1
KEGG: swo:Swol_2188 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.513
EJG08207.1
Protein of unknown function DUF2143; PFAM: Yip1 domain; InterPro IPR019222; KEGG: mpi:Mpet_0448 hypothetical protein; PFAM: Protein of unknown function DUF2143; SPTR: Putative uncharacterized protein.
       0.504
EJG06180.1
KEGG: mla:Mlab_1323 hypothetical protein; SPTR: Peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase.
  
     0.481
EJG07044.1
KEGG: mla:Mlab_0376 chaperonin GroEL; SPTR: ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein.
  
     0.429
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.