STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG08258.1PFAM: Rubrerythrin; COGs: COG1592 Rubrerythrin; InterPro IPR003251:IPR004039; KEGG: mpl:Mpal_0301 rubrerythrin; PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; SPTR: Rubrerythrin. (166 aa)    
Predicted Functional Partners:
EJG08265.1
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
  
  
 0.817
EJG08257.1
Glutaredoxin-like protein, YruB-family; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Glutaredoxin; TIGRFAM: thioredoxin-disulfide reductase; Glutaredoxin-like protein, YruB-family; COGs: COG3634 Alkyl hydroperoxide reductase large subunit; InterPro IPR002109:IPR013027:IPR011911; KEGG: mbn:Mboo_0084 glutaredoxin; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Glutaredoxin; SPTR: Glutaredoxin; TIGRFAM: Glutaredoxin-like protein, YruB.
     
 0.749
EJG07800.1
PFAM: Desulfoferrodoxin; Desulfoferrodoxin, N-terminal domain; TIGRFAM: desulfoferrodoxin FeS4 iron-binding domain; desulfoferrodoxin; desulfoferrodoxin ferrous iron-binding domain; COGs: COG2033 Desulfoferrodoxin; InterPro IPR004462:IPR004793:IPR002742; KEGG: mbn:Mboo_2085 desulfoferrodoxin; PFAM: Desulfoferrodoxin, ferrous iron-binding region; Desulfoferrodoxin Dfx; SPTR: Desulfoferrodoxin; TIGRFAM: Desulfoferrodoxin; Desulfoferrodoxin Dfx; Desulfoferrodoxin, ferrous iron-binding region.
  
  
 0.723
EJG07299.1
PFAM: Rubrerythrin; InterPro IPR003251; KEGG: tme:Tmel_0817 hypothetical protein; PFAM: Rubrerythrin; SPTR: Putative uncharacterized protein.
 
  
 0.627
EJG07690.1
Ferritin Dps family protein; PFAM: Ferritin-like domain; COGs: COG1528 Ferritin-like protein; InterPro IPR008331; KEGG: afu:AF0834 ferritin, putative; PFAM: Ferritin/Dps protein; SPTR: Ferritin, putative.
  
  
 0.598
EJG07845.1
Formate dehydrogenase, alpha subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, archaeal-type; COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterPro IPR006478:IPR006963:IPR006656:IPR006657; KEGG: mem:Memar_1381 formate dehydrogenase, alpha subunit; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Molydopterin dinucleotide-binding region; SPTR: Formate dehydrogenase, alpha subunit (F420); TIGRFAM: Formate dehydrogenase, alp [...]
   
 
 0.593
EJG06511.1
Flavodoxin/nitric oxide synthase; PFAM: Flavodoxin; Metallo-beta-lactamase superfamily; COGs: COG0426 flavoprotein; InterPro IPR008254; KEGG: mpi:Mpet_0105 flavodoxin/nitric oxide synthase; PFAM: Flavodoxin/nitric oxide synthase; SPTR: Flavodoxin/nitric oxide synthase.
 
  
 0.589
EJG08259.1
DNA repair protein RadC; PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc; COGs: COG2003 DNA repair protein; InterPro IPR001405; KEGG: mpi:Mpet_2626 DNA repair protein RadC; PFAM: DNA repair, RadC-like; SPTR: DNA repair protein RadC; TIGRFAM: DNA repair, RadC-like; Belongs to the UPF0758 family.
       0.577
EJG08260.1
PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; COGs: COG0053 Co/Zn/Cd cation transporter; InterPro IPR002524; KEGG: mem:Memar_0167 cation diffusion facilitator family transporter; PFAM: Cation efflux protein; SPTR: Cation diffusion facilitator family transporter; TIGRFAM: Cation efflux protein.
     
 0.562
EJG07925.1
PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; InterPro IPR004360; KEGG: mpi:Mpet_0484 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase.
    
 0.555
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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