STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG08270.1PFAM: Chorismate mutase type II; TIGRFAM: chorismate mutase, archaeal type; InterPro IPR020822; KEGG: mpl:Mpal_1988 chorismate mutase; PFAM: Chorismate mutase, type II; SPTR: Chorismate mutase. (94 aa)    
Predicted Functional Partners:
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
  
 
 0.998
EJG08278.1
PFAM: Prephenate dehydrogenase; COGs: COG0287 Prephenate dehydrogenase; InterPro IPR004455:IPR003099; KEGG: mpi:Mpet_2703 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase; NADP oxidoreductase, coenzyme F420-dependent; SPTR: Prephenate dehydrogenase.
 
 
 0.997
EJG06046.1
PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase; COGs: COG0512 Anthranilate/para-aminobenzoate synthase component II; InterPro IPR000991:IPR006221; KEGG: mbn:Mboo_0227 glutamine amidotransferase of anthranilate synthase; PFAM: Glutamine amidotransferase class-I, C-terminal; SPTR: Glutamine amidotransferase of anthranilate synthase; TIGRFAM: Glutamine amidotransferase of anthranilate synthase.
  
 
 0.992
EJG06047.1
PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR006805:IPR015890; KEGG: mbn:Mboo_0228 anthranilate synthase; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal; SPTR: Anthranilate synthase.
  
 
 0.992
EJG08277.1
PFAM: Prephenate dehydratase; ACT domain; COGs: COG0077 Prephenate dehydratase; InterPro IPR001086:IPR002912; KEGG: mem:Memar_1299 prephenate dehydratase; PFAM: Prephenate dehydratase; Amino acid-binding ACT; SPTR: Prephenate dehydratase.
  
 
 0.992
aroA
3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
  
 
 0.975
EJG07508.1
Beta-ribofuranosylaminobenzene 5'-phosphate synthase family; PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; Protein of unknown function (DUF98); TIGRFAM: beta-RFAP synthase; COGs: COG1907 sugar kinase; InterPro IPR004422:IPR002800:IPR006204:IPR013750; KEGG: mpi:Mpet_2520 beta-ribofuranosylaminobenzene 5'-phosphate synthase family protein; PFAM: Protein of unknown function DUF98; GHMP kinase; GHMP kinase, C-terminal; SPTR: Beta-ribofuranosylaminobenzene 5'-phosphate synthase family; TIGRFAM: GHMP kinase group 1.
 
  
 0.971
rpl29
PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29; InterPro IPR001854; KEGG: mem:Memar_0571 ribosomal protein L29; PFAM: Ribosomal protein L29; SPTR: LSU ribosomal protein L29P; TIGRFAM: Ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.
 
    0.939
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
  
  
 0.924
rps17e
PFAM: Ribosomal S17; COGs: COG1383 Ribosomal protein S17E; HAMAP: Ribosomal protein S17e; InterPro IPR001210; KEGG: mem:Memar_1459 30S ribosomal protein S17e; PFAM: Ribosomal protein S17e; SPTR: 30S ribosomal protein S17e; Belongs to the eukaryotic ribosomal protein eS17 family.
  
    0.911
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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