STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG08311.1KEGG: mpi:Mpet_0420 hypothetical protein. (89 aa)    
Predicted Functional Partners:
EJG08312.1
Protein of unknown function DUF2115; PFAM: Uncharacterized protein conserved in archaea (DUF2115); COGs: COG4066 conserved hypothetical protein; InterPro IPR019215; KEGG: mpi:Mpet_0502 hypothetical protein; PFAM: Protein of unknown function DUF2115; SPTR: Putative uncharacterized protein; Belongs to the UPF0305 family.
       0.578
EJG08310.1
Putative cache sensor protein; PFAM: Cache domain; COGs: COG4564 Signal transduction histidine kinase; InterPro IPR013163; KEGG: mpl:Mpal_2563 putative cache sensor protein; PFAM: Cache, type 2; SPTR: Putative cache sensor protein.
       0.521
EJG08313.1
Multi-sensor signal transduction histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterProIPR001789:IPR000014:IPR001610:IPR003594:IPR 013655:IPR013767:IPR013656; KEGG: mpi:Mpet_0602 multi-sensor signal transduction histidine kinase; PFAM: Signal transduction response regulator, receiver region; PAS fold-3; PAS fold; PAS fold-4; ATP-binding region, ATPase-like; SMART: Signal transduction response regulator, receiver region; PAS [...]
       0.459
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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