STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
putPSodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (493 aa)    
Predicted Functional Partners:
putA
Proline dehydrogenase / 1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.
 
  
 0.995
cstA
Carbon starvation protein A; Pfam matches to PF02554.12 CstA, and to PF13722.4 CstA_5TM.
  
    0.701
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.611
ybeY
Metal-dependent hydrolase (UPF0054 domain); Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
       0.582
ARE80998.1
Aspartate/glutamate ABC transporter, permease protein; Pfam match to PF00528.20 BPD_transp_1.
  
  
 0.567
gltA
Pfam match to PF00285.19 Citrate_synt; Belongs to the citrate synthase family.
   
  
 0.549
ARE80997.1
Aspartate/glutamate ABC transporter, permease protein; Pfam match to PF00528.20 BPD_transp_1.
  
  
 0.531
selD
Selenophosphate synthetase; Synthesizes selenophosphate from selenide and ATP.
       0.521
yedF
Selenium metabolism protein; Pfam match to PF01206.15 TusA; Belongs to the sulfur carrier protein TusA family.
       0.514
ARE80784.1
Na+/alanine symporter family protein; Pfam match to PF01235.15 Na_Ala_symp.
  
  
 0.501
Your Current Organism:
Campylobacter helveticus
NCBI taxonomy Id: 28898
Other names: ATCC 51209, C. helveticus, CCUG 30682, CIP 104877, LMG 12638, LMG 19528, LMG:12638, LMG:19528, NCTC 12470
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